Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01456 ATGGGAGGAACACGTGATAATGGTGGTCGTGACCAAAGTAAAAGGTTTGCACTTGTTGGTGTTTCTTCCATACTTCTTATAGCTATGGTCGCCACCGTCGCTGATGCACAACAAGGACAACCTAAAAACTTTCAGATGTTATGTGAATCAACACAATATCAACAAACATGTCACCAAAGTCTTGCAAAAGCACCGGCAGAAACGGCTGGAGTGAAAGACCTTATCAAAGCAGCTTTCACTGCAACATCAGAGGAGTTATTGAAACATATAAACAGTTCATCTCTTATTCAAGAATTAGGACAAGACAAGATGACAAAACAAGCAATGGAAGTTTGCAATGAAGTTTTGGATTATGCTGTCGATGGAATTCATAAATCTGTTGGTACAGTGGATAAATTTGATATCAATAAGATACATGAATATTCTTATGATCTCAAAGTTTGGTTAACTGGTACACTTTCACATCAACAAACATGTTTGGATGGTTTTGCAAACACAACAACAAAAGCCGGTGAAACAATGGCTAGGGCTTTGAACACTTCTATCCAATTAAGTAGTAATGCTATTGACATGATTGATGCTGTTTATGATTTAACTAATGCTAAAAGGAGGCTTTTGTCACTTGATAATGGTTATCCTTCATGGGTTAGCGAAGGGCAAAGACGACTTCTTGCCGAAGCAACTGTTAAACCTAATGTTGTTGTGGCTCAAGATGGAAGTGGACAGTTTAAGACATTAACGGATGCTATTAAGACTGTTCCTGCCAATAATGCACAAAATTTTGTGATTTATGTTAAGGCTGGTGTTTATAACGAGACTGTTAATGTGCCTAAGGATATGGCTTTTGTTACCATCATTGGTGATGGTCCTGCAAAGACCAAATTCACTGGTAGCCTCAATTATGCTGATGGTCTCCTACCTTACAACACTGCAACCTTTGGTGTTAATGGTGAAAACTTCATGGCAAAGGATATCAGCATCGAAAACACAGCAGGACCAGACAAACATCAAGCAGTTGCACTCCGAGTTACAGCAGACAAAGCAATCTTCTACAACTGCCAAATAGACGGTTACCAAGCAACACTCTTCGCCGAATCCCAACGCCAATTCTACCGTGACTGCAGCATCTCTGGCACAATCGACATGGTCTACGGTGACGCCTTTGCAGTGTTCCAAAACTGCAAGCTAGTCGTAAGAAAACCATTAGAAGAACAACAATGTTTTGTAGCCGCCGACGGAAGATCCAAATCCGACAGCTCAAGTGGCTTTGTTTTCCAAAGTTGTCACTTCACAGGTGAACCAGAAGTAGCAAAGATAGACCCCAAAATAGCTTACCTAGGAAGACCATGGAAGTCATATTCCAAAGTTGTTATTATGGATTCAATCATTGATGACATTTTTGATCCTGAAGGTTACATGCCATGGATGGGAAGTGCTTTTAAAGATACATGTACATTTTTTGAGTATAATAATAAAGGTCCTGGTGCTGACACATCAAAAAGAGTTAAATGGCCTGGTGTTAAGAGTATATCTTCAACTGAAGCAGCTGCTTTTTATCCCGGTAAATTCTTTGAGATTGCGAATGCAACCGATCGTGATACTTGGATTGTGAAGTCTGGAGTTCCTTATTCACTTGCTGCTTTGGATGCTACAAGTAACCAAGGGGCTACTCCAGGTCAGGGAACTGTAACTGGAGCTGGAGCTGGAGCTGAAGGTCCAGCTGCAGCTGGAAAGAGTAGTGGTTTGGTTAACAAAGGTAATATTTGGCTTCAAGTGATTCTTTTGGTTGGGATACTTTCACTATCATCTTCATTCCACTTCTCACGGTAG 1830 0.406 MGGTRDNGGRDQSKRFALVGVSSILLIAMVATVADAQQGQPKNFQMLCESTQYQQTCHQSLAKAPAETAGVKDLIKAAFTATSEELLKHINSSSLIQELGQDKMTKQAMEVCNEVLDYAVDGIHKSVGTVDKFDINKIHEYSYDLKVWLTGTLSHQQTCLDGFANTTTKAGETMARALNTSIQLSSNAIDMIDAVYDLTNAKRRLLSLDNGYPSWVSEGQRRLLAEATVKPNVVVAQDGSGQFKTLTDAIKTVPANNAQNFVIYVKAGVYNETVNVPKDMAFVTIIGDGPAKTKFTGSLNYADGLLPYNTATFGVNGENFMAKDISIENTAGPDKHQAVALRVTADKAIFYNCQIDGYQATLFAESQRQFYRDCSISGTIDMVYGDAFAVFQNCKLVVRKPLEEQQCFVAADGRSKSDSSSGFVFQSCHFTGEPEVAKIDPKIAYLGRPWKSYSKVVIMDSIIDDIFDPEGYMPWMGSAFKDTCTFFEYNNKGPGADTSKRVKWPGVKSISSTEAAAFYPGKFFEIANATDRDTWIVKSGVPYSLAALDATSNQGATPGQGTVTGAGAGAEGPAAAGKSSGLVNKGNIWLQVILLVGILSLSSSFHFSR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01456 609 Gene3D - 229 549 IPR012334 -
Mepo6g01456 609 NCBIfam pectinesterase inhibitor domain 22 192 IPR006501 GO:0004857
Mepo6g01456 609 FunFam Pectinesterase 40 196 - -
Mepo6g01456 609 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 195 IPR035513 -
Mepo6g01456 609 FunFam Pectinesterase 4 229 547 - -
Mepo6g01456 609 PANTHER PECTINESTERASE 25 536 - -
Mepo6g01456 609 Pfam Plant invertase/pectin methylesterase inhibitor 45 191 IPR006501 GO:0004857
Mepo6g01456 609 ProSitePatterns Pectinesterase signature 1. 257 276 IPR018040 -
Mepo6g01456 609 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 195 IPR035513 -
Mepo6g01456 609 Pfam Pectinesterase 232 524 IPR000070 GO:0030599|GO:0042545
Mepo6g01456 609 CDD PMEI-like_3 47 194 - -
Mepo6g01456 609 SUPERFAMILY Pectin lyase-like 228 544 IPR011050 -
Mepo6g01456 609 SMART PMEI_2 39 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01456 Mepo-Chr6 15870617 15873894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01456 9 543 Carbohydrate Esterase AT5G49180 44.014 1.68e-170 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01456 K01051 - gmx:100784682 740.339