Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01447 ATGTGTGGAGGTGCTATCATTTCTGATTTCATTGGTGTGAAACGTGACCGTGACCTATGGTTTGAGCTTGATCCTTCTGTTGATCTACTTGGTCTTGGTGGTGGTGCTGCTGCTTTTAACACCCCCACTTCCAAAGAGCTTCCACCTCTTAGCTTTGAGAAATTCTTCTCATCAGACAACAAAGTGGTGGCATGTGACAATGCTGAGAAGAAACAAAGTTTGGTAACTATAGAGAAGGGTAAGAAGAGCACTGGAGGCAAAAGAGCCCGTAAGAATGTTTACAGAGGAATCAGACAAAGGCCATGGGGCAAATGGGCTGCAGAAATAAGGGACCCACAACAAGGTGTTCGTGTTTGGCTAGGTACTTTCTCAACTGCTGAAGAAGCTGCTAGAGCTTATGACGCCGCGGCCAGGCGCATTCGCGGCGACAAGGCTAAGCTCAATTTCCCTGACACTCCTGCTGATGCTGCTGTCACTGCTCCTCCAACAAAGAAGCGGTGTGTTAGCCCCGATCAAGCCAGTTCCCAGGCTAGCTCTGAGTCAACTGAGTCTGGGTTTGGGCTTGATGAGGAAATGGAAATCAAGCAGAAGATGTCTGACCTTGAATGGATCCTTGGCTTGGATAGTGATATCCCTCAGGCCCAAGCCCAGGCCCCAACCCAAGTTGATGCCCAGCCTGAGCCAGAGCCTGTGCCTTTCACCATGCCTGCTGATTGGGACAACAGCTTCATGGACTTTTGGACTTCTGAAGACATGGTTGATCCCATCCGTCACCTCCTATATAACTAA 789 0.493 MCGGAIISDFIGVKRDRDLWFELDPSVDLLGLGGGAAAFNTPTSKELPPLSFEKFFSSDNKVVACDNAEKKQSLVTIEKGKKSTGGKRARKNVYRGIRQRPWGKWAAEIRDPQQGVRVWLGTFSTAEEAARAYDAAARRIRGDKAKLNFPDTPADAAVTAPPTKKRCVSPDQASSQASSESTESGFGLDEEMEIKQKMSDLEWILGLDSDIPQAQAQAPTQVDAQPEPEPVPFTMPADWDNSFMDFWTSEDMVDPIRHLLYN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01447 262 SUPERFAMILY DNA-binding domain 93 151 IPR016177 GO:0003677
Mepo6g01447 262 PANTHER DNA-BINDING DOMAIN 73 181 IPR044808 GO:0003700|GO:0009873
Mepo6g01447 262 CDD AP2 94 152 IPR001471 GO:0003700|GO:0006355
Mepo6g01447 262 MobiDBLite consensus disorder prediction 168 185 - -
Mepo6g01447 262 Gene3D AP2/ERF domain 93 151 IPR036955 GO:0003700|GO:0006355
Mepo6g01447 262 MobiDBLite consensus disorder prediction 151 187 - -
Mepo6g01447 262 FunFam Ethylene-responsive transcription factor 2 92 151 - -
Mepo6g01447 262 ProSiteProfiles AP2/ERF domain profile. 93 150 IPR001471 GO:0003700|GO:0006355
Mepo6g01447 262 Pfam AP2 domain 93 142 IPR001471 GO:0003700|GO:0006355
Mepo6g01447 262 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Mepo6g01447 262 PRINTS Ethylene responsive element binding protein signature 116 132 IPR001471 GO:0003700|GO:0006355
Mepo6g01447 262 SMART rav1_2 93 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01447 Mepo-Chr6 15765100 15767566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01447 1 223 AP2-EREBP Transcription Factor Family AT3G16770 41.699 3.81e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g01447 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01447 K09286 - gmx:100817253 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01447 6 15765100 15767566 Mepo6g01447 6 15765100 15767566 ECH