Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01439 ATGGGACAAGAATCATCAGATTACAAAAACCAGTTGGTATTAGATATATGCTCCATTTCCAACCGTTCAGTTCTATGTGTTCATACACTTTCCTCTAATGCACATTTCATTGATTGGTATTGCATTCTTGGTGTGGAAGAAAATGCAGGTGTAAATACCATTCGTAAGAAATACCATAAACTTGCCTTGCAACTTCATCCAGATAAGAATAAACATCCCAAGTCTGAAATTGCATTCAAGCTTGTCTCTGAGGCATATACATGTCTATCTGATGCTGCAAAAAGAAAAGCTTTTAACTTAGAAAGACACAATAGCTTCTGCATTGAGTGCAACAAAATTCCATATAAATCCAACATTGTTCCTTGCAATTCTAATGGTTCAAGTTTCAAGCCATGGAACATTATCAGCAAATCAATATCTAGTAAAGTTAGAAGAAACATTAAGGACATGAGAGAAAGATTGAAGGAAGAGGCTAAGGTGATAGAGAATTGTCTAAGAAAAAATTCAGTGTCAAAGAACGAATCTCCACTCTACAATCCACCCAAGTATCATCTACATGGAGACAAGTCACAGGATAGAGTTGAGAAAGAAATTCCTGTTTTCAATCCATCAAATTACAAGTATCAAAGCTACCCTCGTCCTAGAGACCATGCTTACAAGAATTCCAAGAGTTTTTGGTACTTGCAGAAAGAAAATATGGTGCGCAATGACAAGGGAGATGCTAAAGCGAAGTATACCTCTCCGGTTTTTGAAGTCAAATCAAGTAGCATGGACACAAGAAAATTTGCTTGTGTTTCATCACAATGTTAG 810 0.3642 MGQESSDYKNQLVLDICSISNRSVLCVHTLSSNAHFIDWYCILGVEENAGVNTIRKKYHKLALQLHPDKNKHPKSEIAFKLVSEAYTCLSDAAKRKAFNLERHNSFCIECNKIPYKSNIVPCNSNGSSFKPWNIISKSISSKVRRNIKDMRERLKEEAKVIENCLRKNSVSKNESPLYNPPKYHLHGDKSQDRVEKEIPVFNPSNYKYQSYPRPRDHAYKNSKSFWYLQKENMVRNDKGDAKAKYTSPVFEVKSSSMDTRKFACVSSQC 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01439 269 Coils Coil 147 167 - -
Mepo6g01439 269 SUPERFAMILY Chaperone J-domain 30 104 IPR036869 -
Mepo6g01439 269 Pfam DnaJ domain 38 99 IPR001623 -
Mepo6g01439 269 PRINTS DnaJ domain signature 58 73 IPR001623 -
Mepo6g01439 269 PRINTS DnaJ domain signature 40 58 IPR001623 -
Mepo6g01439 269 PRINTS DnaJ domain signature 74 94 IPR001623 -
Mepo6g01439 269 ProSiteProfiles dnaJ domain profile. 38 102 IPR001623 -
Mepo6g01439 269 Gene3D DnaJ domain 37 158 IPR036869 -
Mepo6g01439 269 PANTHER BNAC03G44070D PROTEIN 25 234 - -
Mepo6g01439 269 SMART dnaj_3 37 94 IPR001623 -
Mepo6g01439 269 CDD DnaJ 38 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01439 Mepo-Chr6 15674686 15676321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01439 38 99 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 3.74e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01439 - - gmx:100778573 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01439 6 15674686 15676321 Mepo6g01439 6 15674686 15676321 ECH
Mepo1g00727 1 6965790 6967125 Mepo6g01439 6 15674686 15676321 PCT