Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01415 ATGAAACTCAACAACAACAACAAAATTTCCATGTCAACTTCAACTTCACCATCAAACTCCGGCAACCTTGTCTCCGACCAGTTTCCGGCGGGTCTCCGAGTACTTGTTGTCGATGATGACCCTACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTATGAAGTTACCAAGTGTAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAATAAAAATGGGTTTGACATTGTTTTAAGCGACGTGCATATGCCTGATATGGATGGATTCAAACTTTTGGAACATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGAAAAAATGTGGTAATGAAGGGTGTGACACATGGTGCTTGTGATTATCTAATCAAACCTGTGCGAATTGAGGCTTTGAAGAATATATGGCAGCATGTGGTTAGGAAGAGAAGGAATAGCTGGAAAGATCTGAAGCAATCTGGTGGATTAGATGAAAGAGATCAAGAAAAAAAGGCGTCCACTGATGCCAATTACTCATCTTCAACGAATGAAGGCAAGAGCTCAAAGAAGAGGAGGGATGAAGAAGATGAAGCAGATGATAGGGATGATTGTTCGACGTCAAAGAAGCCACGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGCTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCCAGTCATCTTCAGAAATACCGTTTGTATCTTCGAAGGTTGAGTGGAATTTCCCCGCAGCAAAGTAACTTGAACAACTCTTTCATGAGTACGCAAGGGTCAATATTTGGAGGAACCTCTGTAAATGAAATTGATCTTCAAACCCTTTCAGCTTCTGGCCAGTTCTCAGCGCAAAGTCTTGCCAAGCTTCAAGCAGCAGGACTTTACAGTCCTGAGAACTCAAAACTAAGATTTGGAGATGGGCAACTGCAACATATGAGCAGCAGTAAACCGGTGAACTTTCTTCACGGAATCCCTATCAACATTGAGCCGAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAATCCTTTGGCAGCGCAAATACGCGAGTCAATGCTTCTGCTGCAAAGAGAAGCCCCTGGTTGACGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATGCTAAATGAGAATGCAAATTCTCATGCTACAAGGTTTCCATCATCTTTAATGCAACCTACAGGACCAAATGGAATATTAGTCAATAGTTTCCCTCTTAGATGCACTCCGGGTATATCCAGTAGCAGTACAAAAGGTGTGTTTCATGCGGAAGCTACTTCGGGAATTAAAGGATTAGGGGGATTTAGTTATGATGTTTATAATGAACTCCATCAGAAGTCCAATGATTGGGGATTAGCAAATACAGGCCTGACATATGATGCTTCTCAACATGCAAATCCTTTACAAGGCAACATTGATGTCTCACCGTCGAGTTTAGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTGATCACCAAAATGTTGGTCAACACCTCATTACACCTTTTGTTGACAATTCATTAAGGGGTAAGAGTGAAAGAATTCCGGGTACAAACATCGAGATTAACCCCTTCTCTGATCAAGTCGGTCAAGAGGATCTCATGAGTGTGTTTCTGAACCAGCACAAAGGCGTTGGACAGGTTGATAATGAGTTTGACTTTGATGGATATTCCATAGACAACATTCCAGTTTATAACAGATCCTGTTAG 1821 0.4201 MKLNNNNKISMSTSTSPSNSGNLVSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRRNSWKDLKQSGGLDERDQEKKASTDANYSSSTNEGKSSKKRRDEEDEADDRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGISPQQSNLNNSFMSTQGSIFGGTSVNEIDLQTLSASGQFSAQSLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPINIEPKQFANFHQSAQSFGSANTRVNASAAKRSPWLTQMAQSQPRGQMLNENANSHATRFPSSLMQPTGPNGILVNSFPLRCTPGISSSSTKGVFHAEATSGIKGLGGFSYDVYNELHQKSNDWGLANTGLTYDASQHANPLQGNIDVSPSSLGHRGFSSIQQTRQNRDGMSQGDHQNVGQHLITPFVDNSLRGKSERIPGTNIEINPFSDQVGQEDLMSVFLNQHKGVGQVDNEFDFDGYSIDNIPVYNRSC 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01415 606 FunFam Two-component response regulator 32 169 - -
Mepo6g01415 606 SUPERFAMILY CheY-like 31 157 IPR011006 -
Mepo6g01415 606 MobiDBLite consensus disorder prediction 186 207 - -
Mepo6g01415 606 MobiDBLite consensus disorder prediction 1 22 - -
Mepo6g01415 606 MobiDBLite consensus disorder prediction 158 174 - -
Mepo6g01415 606 Gene3D - 206 269 - -
Mepo6g01415 606 MobiDBLite consensus disorder prediction 158 207 - -
Mepo6g01415 606 SUPERFAMILY Homeodomain-like 207 267 IPR009057 -
Mepo6g01415 606 Pfam Myb-like DNA-binding domain 212 262 IPR001005 -
Mepo6g01415 606 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 355 IPR045279 GO:0009736
Mepo6g01415 606 SMART REC_2 32 144 IPR001789 GO:0000160
Mepo6g01415 606 CDD REC_typeB_ARR-like 34 148 - -
Mepo6g01415 606 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 266 IPR017930 -
Mepo6g01415 606 ProSiteProfiles Response regulatory domain profile. 33 148 IPR001789 GO:0000160
Mepo6g01415 606 Gene3D - 32 167 - -
Mepo6g01415 606 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 263 IPR006447 GO:0003677
Mepo6g01415 606 FunFam Two-component response regulator 206 269 - -
Mepo6g01415 606 Pfam Response regulator receiver domain 34 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01415 Mepo-Chr6 15381576 15385032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01415 66 601 Response Regulator Gene Family AT3G16857 44.601 1.28e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo6g01415 Response_reg 4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01415 - K14491 tpra:123885541 1029.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01415 6 15381576 15385032 Mepo6g01415 6 15381576 15385032 ECH
Mepo1g00711 1 6813326 6817546 Mepo6g01415 6 15381576 15385032 PCT