Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01393 ATGACGCTATTACCAATCTCACTCTCTTCCTCCGTCCCCACCATTTCGGTACCACACCACTCTTCCCTCTTCAACACCACTGCCACGTCACTCAATCTCCGTTTCTGTACTCTCAGACCCGAAGCCTTCACTTTCACTTCACTCCGCCATCGCTCACCACGCAACCACCACCTCCGCCGAACACACCTCAATGCAGTATCCGCCGCAATTTCAAATAACGGCACTCCTCCTAAATCATTCGATTACGATTTGCTTATTATCGGAGCTGGTGTTGGTGGTCACGGTGCCGCTCTTCACGCCGTCGAGAAGGGTTTGAAAACAGCAATTGTTGAAGGAGATGTGGTGGGAGGTACATGTGTCAACAGAGGTTGTGTTCCTTCTAAAGCTCTATTGGCTGTAAGTGGTCGTATGCGAGACCTCAGGAATGATCATCATTTGAAGTCGCTCGGCATTCAGGTTTCTAATGCTGGATATGACAGACAAGCAGTTGCTGACCATGCTAATAATCTTGCTTCGAAAATTCGCGGTAACTTGACCAACTCGATGAAAGCACTTGGAGTCGATATACTCACTGGTTTTGGAACTATTTTGGGTCCTCAAAAGGTGAAAATTGGCTCTTCCAACAATGTAGTAACTGCAAAAGACATTATCATTGCCACTGGTTCCACTCCTTTTGTTCCTAAGGGAATTGAAGTCGATGGGAAGACTGTGATCACCAGTGACCATGCACTTAAGTTGGAGACAGTTCCTGACTGGATAGCAATTGTTGGAAGTGGTTATATCGGCCTTGAATTCAGTGATGTATATACGGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTTCTCATAAATCCCAGGAATATTGACTATCATACTGGCGTTTTTGCATCCAAGATAACTCCTGCAAGAGATGGAAAACCTGTAATGATTGAGCTTATTGATGCAAAAACCAAGGAGAAAAAGGAAACTTTAGAGGTGGATGCTGCATTAATTGCAACTGGAAGGGCTCCATTCACACAAGGTCTGGGGTTGGAGAATATTGACGTTGCAACACAGCGTGGTTTTGTTCCCGTGGATGAGCGTATGAGAGTAATTGATGCAAATGGAAACCTGGTCCCTCATTTATATTGTATTGGCGATGCAAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAGCAAGTCACTGGAAGAGATCATGTGCTCAATCATTTAAGCATACCAGCTGCTTGTTTCACTCATCCTGAAATTAGCATGGTTGGTTTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAGGAAGGGTTTGACGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAAGCCTTGGCAGAAAATGAAGGAGAGGGTCTTGCCAAGTTAATATACAGACCTGACAACGGAGAGATACTAGGAGTTCATATATTTGGGTTGCATGCTGCAGATCTCATCCACGAGGCTTCCAATGCAATCGCATTAGGGACACGTATTCAGGATATTAAATTTGCAGTTCATGCTCATCCAACTTTGTCTGAGGTGCTTGATGAGCTATTTAAATCAGCAAAGTCTACTGAGATGTGGACTCTCATTGTGACCACTATAATCTACTTAGCTCTTGGATTAATTATTCCACAAACCTATAATTTTGCTTTCACCTATAGCCACAGTCACCGGAACCTTCATCAGTCGTCAAAACCACCGTCAAAGCCAATTTCTGCCGTTGTTCTCACTAACCCACCACCCAACTCACCACCACCAGCAGCAGCAGCACCCGCTGCTATGTTTGTTGTTGCATCTTCCATTTGCAGTGATATTCCACTCTTAAAACCAATAAAGATGAAAACTTTCTCCTCAATTCAACCACCCCACAATTTCCATTCCACACTATTTTTCTCTTACACTTCCATAAGGACTCAACTTCCTTCCTCTACAAGGGTCTTTTTTTCTCAGCCAAAATCTGACACAGACGAGTCATTAAACGTAAAACTGTTGCCTCCTACCCTATTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTAACCTTGTTTTTGAAGAAACGAGGTTTGAGCAATGCAAATGCAGCAAGAACGATTAACAAGTCGGATCCTTTTATTGATCACCTTCTCTCAAAGCTTCACTCTAAACACAAAACTTGGTACCTTTCAGGGAGAGAGCTTACAACTCTTGAGATCAGGGATGCTCTTATCTCTTATCTCGAATCACTTTACGAAGAGCATGGAGAAATTCTAGTGGATGTAGTGGAAAACTATCCAAATCCACCCGTTAAGGATAAATCGGACGCACCAATTCCACCTCCTAATCCTAGTCCAGCGGTAGACTCTAAGAAAGTTAAAGCCGTGTCTCGAGTGAGTGGTATAGACCCTGCTGAGGGAAATCTTCGTCCTCATATTGCTTATCTGATGGAATTCGGAATGAATACTGACCAGGTTAGGACTATTATGCGACGATTCCCAGCTTTTGCCTACTATAGTTTGGAGGGTAAAATTAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTACCAAAAGAAAAAATTCTCATTATCCTCACGAAAAGGCCTCAATTATGTGGAATCAGTCTATCCAAAAATCTTAAGCCCACCATGAAATTCTTTGAATCTTTAGGTGTTGACAAGGAACAATGGGCGAAAGTGATCTACCGTTTCCCAGCCCTGCTAACTTATAGCACGCAGAAGATTAATGAAAGTGTAGATTTTCTCCGCGAATTTGGCGTCTCAGAAGAGAACATAGGTAAGATTTTAACTCGCTGCCCAAATATTATTGGTTACAGTGTAGAGGACAATCTTCGACCGACAGCAATGTACTTCCGTTCTCTAGGGGTTGATGTTGGCATTCTTCTATTCAATTGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATATAAAGCCCATAACACAATTTTTCTTGGAGAGAGGATACACCATGGAAGAAATTGGGATTATGATTATGAGATATGGAATGTTGTACACATTCAGCTTGACTGAGAATTTGATGCCGAAATGGGATTACTTTTTGACTATGGATTACCCAAAATCTGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAGTTTAGAGCAAAGAATTAAACCGAGATATGCACGCGTGAAAAATTCTGGGGTAAAATTACTGTTGAATCAGGTTCTTTCACTGTCAAGCAGCAACTTTGAAGAGGTCTTAAGAAAGAAAATAAAGAAAATGCAAGTTGATTAG 3342 0.4228 MTLLPISLSSSVPTISVPHHSSLFNTTATSLNLRFCTLRPEAFTFTSLRHRSPRNHHLRRTHLNAVSAAISNNGTPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRDLRNDHHLKSLGIQVSNAGYDRQAVADHANNLASKIRGNLTNSMKALGVDILTGFGTILGPQKVKIGSSNNVVTAKDIIIATGSTPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVMIELIDAKTKEKKETLEVDAALIATGRAPFTQGLGLENIDVATQRGFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKSTEMWTLIVTTIIYLALGLIIPQTYNFAFTYSHSHRNLHQSSKPPSKPISAVVLTNPPPNSPPPAAAAPAAMFVVASSICSDIPLLKPIKMKTFSSIQPPHNFHSTLFFSYTSIRTQLPSSTRVFFSQPKSDTDESLNVKLLPPTLLAAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKTWYLSGRELTTLEIRDALISYLESLYEEHGEILVDVVENYPNPPVKDKSDAPIPPPNPSPAVDSKKVKAVSRVSGIDPAEGNLRPHIAYLMEFGMNTDQVRTIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKILIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESVDFLREFGVSEENIGKILTRCPNIIGYSVEDNLRPTAMYFRSLGVDVGILLFNCPQNFGLSIEANIKPITQFFLERGYTMEEIGIMIMRYGMLYTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYARVKNSGVKLLLNQVLSLSSSNFEEVLRKKIKKMQVD 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01393 1113 Gene3D Transcription termination factor 3, mitochondrial 889 1108 IPR038538 -
Mepo6g01393 1113 SMART mt_12 986 1017 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 1054 1085 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 953 984 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 1022 1053 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 809 841 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 882 913 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 846 877 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 SMART mt_12 918 948 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 116 126 IPR012999 GO:0016668
Mepo6g01393 1113 PRINTS FAD-dependent pyridine nucleotide reductase signature 379 401 - -
Mepo6g01393 1113 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Mepo6g01393 1113 PRINTS FAD-dependent pyridine nucleotide reductase signature 84 103 - -
Mepo6g01393 1113 PRINTS FAD-dependent pyridine nucleotide reductase signature 345 361 - -
Mepo6g01393 1113 PRINTS FAD-dependent pyridine nucleotide reductase signature 252 270 - -
Mepo6g01393 1113 PANTHER DISULFIDE OXIDOREDUCTASE 79 550 - -
Mepo6g01393 1113 MobiDBLite consensus disorder prediction 789 808 - -
Mepo6g01393 1113 MobiDBLite consensus disorder prediction 589 611 - -
Mepo6g01393 1113 FunFam Dihydrolipoyl dehydrogenase 432 556 - -
Mepo6g01393 1113 FunFam Putative dihydrolipoyl dehydrogenase 225 352 - -
Mepo6g01393 1113 SUPERFAMILY FAD/NAD(P)-binding domain 63 423 IPR036188 -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 346 360 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 520 540 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 498 513 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 429 450 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 394 401 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 216 225 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 115 130 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 83 105 - -
Mepo6g01393 1113 PRINTS Pyridine nucleotide disulphide reductase class-I signature 252 277 - -
Mepo6g01393 1113 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 432 551 IPR016156 GO:0016491|GO:0050660
Mepo6g01393 1113 Gene3D - 225 352 IPR036188 -
Mepo6g01393 1113 NCBIfam dihydrolipoyl dehydrogenase 82 551 IPR006258 GO:0004148|GO:0050660
Mepo6g01393 1113 Pfam Pyridine nucleotide-disulphide oxidoreductase 82 414 IPR023753 GO:0016491
Mepo6g01393 1113 Gene3D - 432 555 IPR016156 GO:0016491|GO:0050660
Mepo6g01393 1113 Pfam mTERF 694 942 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 Pfam mTERF 933 1100 IPR003690 GO:0003690|GO:0006355
Mepo6g01393 1113 Gene3D - 82 415 IPR036188 -
Mepo6g01393 1113 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 433 544 IPR004099 -
Mepo6g01393 1113 MobiDBLite consensus disorder prediction 792 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01393 Mepo-Chr6 15096505 15111149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01393 6 550 Acyl Lipid Metabolism Gene Families AT3G16950 82.759 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo6g01393 Pyr_redox_2 9.1e-58 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01393 K00382 - gmx:100803176 941.414