Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01372 ATGGAAAACTTGTGCAATTTTGGTGACTTGAGTTTCAATATAGTTGAGGATAAACTCAGTTCATCCAATGATACATTTTGGGAAACCAAAGGGCATAATGAAATGAAAAATGTTCAATTTTCTGTAGAAGAAGATCTAGGAGACTATAATGGAATTGAGTCTCTTTGCTCTAATTTTGGTTTCATTGAAGATGATCCATCACAAAAAGATGAGTTCCTAAAGTATCATCACCAACATCAACAAGGATTATATCAAGATTATGAAAATTTTGATAACCTACACTTTGACATGGTTCACTTTGATGAACAATGTCCAACAAAAATTCTTCCACTTTGTGACACAAAAAAGGACGAACCATTCTACCAAACTCCTTTAGCACCAGTTGACATATTGAAGAATTATGGTAAAGGATTCAAGAGGTTATTACCTGACGATGAAGGAAAAATCCTTCATCCGGTTAATGACTTTGGTTTAGTCACAAATAATGAAAATGAGAAAAAGTTGTTGTCAACTATAGAGATCATGAAGATGGCTGGAACAAGGTTCATACAATCATCATCTTCGTCGAAATCTGCATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCCGGTTTATCTGATGAAGAGAAAGAAGATGTTTCACTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTCGGATATCAACAATATGAACGCGCTAGAAAATTGTTATCACAAATTGAGTCTTTATCTTTGAAGACAGGTAACCCGGTTAAGCGCGTGGTTCATTATTTTGCTCAAGCTCTTCGCCAAAGAATCGACAAAGAAACAGGACGATTTTCTGTTTCATCTAACAACATGCAAAAGATGGAATCTTTATTTGATCCTGAAGAGGTTAGCAAGGATCTAAACCCGGCCATGATCGCACTTTACGAAGATCTTCCATTCAGTCAAGTTTCAATATTCACATGTGTACAAGCTTTATTGGAAAATGTAAATGATGCAAAGAAGATTCATGTTATTGATCTCGAAATTCGAAAAGGTTGTCAATGGACAATCCTAATGCAAGCACTTCAATCGAGAAACGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTGAGAGCGGAAACTCAGACACTTCGAAGCATATAGTTGAGGACACTGGTAAAAGATTGAAGGATTTTGCGCAAAGTTTGAACATACCTTTTTCGTTCGATATAGTTATTGTATCTGATTTGTTAAATATAAGAGCAGATCTTTTCAAGATAGATTCGGAAGAAACAGTCGCGGTTTATTCTCAATTTGCGCTTAGAAGCAAGATTCAACAACCAGACAAACTCGAAACAATCATGAGAGTGATTATAACCATAAATCCTATAGTAATGGTTGTCGCCGAGATTGAAGCTAATCACAATTCCAAATCTTTTGTGAACCGTTTCATCGAAGCACTTTTTTACTTTAGTGCATATTTTGATTGTTTTGAGACTTGTATGAAAGGTGATGAGAAGAACAGATTTATTCTAGAGTCAATGTATTTTAGTCATGGTATTAGGAATATTGTGGCTGAAGAAGGAGCTGAAAGAAAGAGTAGGGATGTAAAGATTGATGTGTGGAGAGCATTTTTCACAAGATTTGGAATGGTGGAAACAGAATTGAGTATGAAGTCTTTGTATCAAGCTGAATTAGTGGCTAAAAGATTTGCTTGCGGATATGCTTGCACATTTGATATGAATGGTCATTGTCTTCTTGTTGGATGGAAAGGAACACCCATTAATTCTGTTTCTGTTTGGAAATTCATTTGA 1797 0.3556 MENLCNFGDLSFNIVEDKLSSSNDTFWETKGHNEMKNVQFSVEEDLGDYNGIESLCSNFGFIEDDPSQKDEFLKYHHQHQQGLYQDYENFDNLHFDMVHFDEQCPTKILPLCDTKKDEPFYQTPLAPVDILKNYGKGFKRLLPDDEGKILHPVNDFGLVTNNENEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKEDVSLAESLLACAEKVGYQQYERARKLLSQIESLSLKTGNPVKRVVHYFAQALRQRIDKETGRFSVSSNNMQKMESLFDPEEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQSLNIPFSFDIVIVSDLLNIRADLFKIDSEETVAVYSQFALRSKIQQPDKLETIMRVIITINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKSRDVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFDMNGHCLLVGWKGTPINSVSVWKFI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01372 598 ProSiteProfiles GRAS family profile. 209 596 IPR005202 -
Mepo6g01372 598 Pfam GRAS domain family 219 596 IPR005202 -
Mepo6g01372 598 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 187 591 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01372 Mepo-Chr6 14933458 14935298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01372 208 597 GRAS Transcription Factor Family AT3G03450 30.534 1.08e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo6g01372 GRAS 2.1e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01372 - - gmx:100798926 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01372 6 14933458 14935298 Mepo6g01372 6 14933458 14935298 ECH