LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g01357	ATGAAACTTCTCATTTTTATCTTGTTTTTTGTACCATATTGTGCTCTTGCCTTTGATGTAAAAACGGTCATAGACTCTCCTATGCTAACACAAAAGGTAGGAACTAATCGCACTATTAAAGTTGATATCAATGGAAATGGAGAATTTAAATCAGTACAAGCCGCCATAGATTCAATTCCTGAAGGAAATTCTAATTGGGTCATCATCCATATTAGAAAAGGAGTATATAGGGAAAAAGTGCACATACCAAAGAATAAGCGTTATATATTTATGAGAGGAAATGGAAGAGGAAAAACTGCCATTGTTTGGTCTGAAAGCTCCTCTAACAATATAGCTTCTGCCACCTTCAAAGTTGAAGCCTCCGATTTCATTGCCTTTGGAATTAGCTTCAAGAATGATGCACCTACAGGAGTTGCCTATACTTCACAAAATCAATCTGTGGCAGCATTTGTGGCAGCGGAGAAAGCTGCATTTTATCATTGTGCATTTTATAGTACACACAACACACTCTTTGATTACAAAGGTAGACATTACTATGAGTCTTGTTACATTCAAGGCTCCATTGATTTCATATTTGGTCGTGGTCGAACCATCTTTCAAAATTGTGAGATATTTGTGGTTGATGACAAAAGGATAACAATTCGTGGGTCAATTACGGCTGCAAATAGAGAAAATGAAAGTGAGATGAGTGGATTTATATTTATCAAAGGCAAAGTATATGGCATTGGTGGTGTGTACTTAGGAAGGGCTAAAGGTCCTTATTCTAGGGTCATTTTTGCTAAGACATACCTCTCCAAAACCGTTGTCCCTGAAGGATGGACCAATTGGAGTTATGATGGTAGCACTGAACATCTTTACCATGCGGAGTATAAATGCCATGGACCTGGAGCCATAACAGAGAAAAGAGCTTCTTGGTCAAGGCAGCTTAGTGATGAAGAAGCTGCTCCATTTATATCTATCGATTACATTGATGGCAAGAATTGGTTACCAGCGTGGGTATAA	1002	0.3812	MKLLIFILFFVPYCALAFDVKTVIDSPMLTQKVGTNRTIKVDINGNGEFKSVQAAIDSIPEGNSNWVIIHIRKGVYREKVHIPKNKRYIFMRGNGRGKTAIVWSESSSNNIASATFKVEASDFIAFGISFKNDAPTGVAYTSQNQSVAAFVAAEKAAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRTIFQNCEIFVVDDKRITIRGSITAANRENESEMSGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAKTYLSKTVVPEGWTNWSYDGSTEHLYHAEYKCHGPGAITEKRASWSRQLSDEEAAPFISIDYIDGKNWLPAWV	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g01357	333	Gene3D	-	33	332	IPR012334	-
	Mepo6g01357	333	Pfam	Pectinesterase	40	325	IPR000070	GO:0030599\|GO:0042545
	Mepo6g01357	333	ProSitePatterns	Pectinesterase signature 2.	184	193	IPR033131	-
	Mepo6g01357	333	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	30	329	-	-
	Mepo6g01357	333	SUPERFAMILY	Pectin lyase-like	35	331	IPR011050	-
	Mepo6g01357	333	FunFam	Pectinesterase	33	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g01357	Mepo-Chr6	14786873	14789098	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g01357	36	329	Carbohydrate Esterase	AT5G47500	39.474	2.31e-74	231

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g01357	-		-	gmx:100792967	585.874