Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01355 ATGAGAGGAAATGGAAGAGGAAAAACTGCCATTGTTTGGTCTGAAAGCTCCTCTAATAATATAGCTTCTGCCACCTTCAAAGTTGAAGCCTCCGATTTCATTGCCTTTGGAATTAGCTTTAAGAATGATGCTCCTACAGGAGTTGCCTATACTTCACAAAATCAATCTGTTGCAGCATTTGTGGCAGCAGAAAAAGCAGCATTTTATCATTGTGCATTTTACAGTACACACAACACACTCTTTGATTACAAAGGTAGACATTACTACGAGTCTTGTTACATTCAAGGCTCCATTGATTTCATATTTGGTCGTGGCAGAACCATCTTCCAAAATTGTGAGATATTTGTGGTTGATGACAAAAGGATAAAAATTCGTGGGTCAATTACAGCTGCAAATAGAGAAAATGAAAGTGAGATGAGTGGATTTATATTTATCAAAGGCAAAGTATATGGCATTGGTGGTGTGTACTTAGGAAGGGCTAAAGGTCCTTATTCTAGGGTCATTTTTGCTAAGACATACCTCTCCAAAACTGTTGTCCCAGAAGGATGGACCAATTGGAGTTATAATGGTAGCACAGAACATCTTTACCATGCGGAGTATAAATGTCATGGACCTGGAGCCACAACAGAGGGAAGAGCTTCTTGGTCAAGGCAACTTAGTGATGAAGAAGCTGCTCCATTTATATCTATTGATTACATTGATGGCAAGAATTGGTTGCCATCGTGGATATAA 732 0.3907 MRGNGRGKTAIVWSESSSNNIASATFKVEASDFIAFGISFKNDAPTGVAYTSQNQSVAAFVAAEKAAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRTIFQNCEIFVVDDKRIKIRGSITAANRENESEMSGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAKTYLSKTVVPEGWTNWSYNGSTEHLYHAEYKCHGPGATTEGRASWSRQLSDEEAAPFISIDYIDGKNWLPSWI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01355 243 Gene3D - 1 242 IPR012334 -
Mepo6g01355 243 Pfam Pectinesterase 1 235 IPR000070 GO:0030599|GO:0042545
Mepo6g01355 243 FunFam Pectinesterase 1 243 - -
Mepo6g01355 243 ProSitePatterns Pectinesterase signature 2. 94 103 IPR033131 -
Mepo6g01355 243 SUPERFAMILY Pectin lyase-like 2 241 IPR011050 -
Mepo6g01355 243 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01355 Mepo-Chr6 14780672 14781940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01355 1 239 Carbohydrate Esterase AT1G05310 38.211 1.62e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01355 - - lja:Lj6g3v1915720.1 445.662