Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01349 ATGTCATCACCTATGATCTCAAACCCAACATCAACAACTGATCGATCACACAGAATAAGGAAAAAGAAGAAAGCCCAATCCAAAACCCAACAAGCCCAAGAACAACAACAGAGAGAAAATAGCCGCGCCAAATGGAGATCACAAGCACAACAACAAATATACTCTTCTAAACTCCACCAGGCTCTGGCGAGAGTCAACATCGGCGGCACCACTGGAGGGACTCGTCGAGGCAAGGCCGTCCGTGAAGCCGCTGACAGAGCTCTCGCCGTCGCCGCAAAAGGAAGAACAAGATGGAGTAGAGCTATACTAAAAAACAAGCTCAGACTCAAATTCAGAAAACAGAAGAGACATCAACAGAACCGGGCTGTTGGACCGGCCCGGTCTAAAAAAGCCCGGTTCGGTGTTTTACGTCTTAAAGGAAAGACTCTACCAGCGGTTCAGAGAAAAGTTAAAATTCTGGGCCGGTTAGTTCCTGGTTGTAGAAAAGAACCGTTACCGGTTATTCTTGAAGAAGTTATTGACTATATACCAGCTCTTGAGATGCAAGTTCGTGCCATGTCAGCCCTAGCTGATTTACTCTACGGTGCTTCCTCTTCTTCCGCCGCCGTTACCGGCGGTGGCTCCGGGATCCCGCCGGCGAGTTAA 645 0.4868 MSSPMISNPTSTTDRSHRIRKKKKAQSKTQQAQEQQQRENSRAKWRSQAQQQIYSSKLHQALARVNIGGTTGGTRRGKAVREAADRALAVAAKGRTRWSRAILKNKLRLKFRKQKRHQQNRAVGPARSKKARFGVLRLKGKTLPAVQRKVKILGRLVPGCRKEPLPVILEEVIDYIPALEMQVRAMSALADLLYGASSSSAAVTGGGSGIPPAS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01349 214 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 46 196 IPR044660 GO:0006355
Mepo6g01349 214 MobiDBLite consensus disorder prediction 29 52 - -
Mepo6g01349 214 MobiDBLite consensus disorder prediction 1 52 - -
Mepo6g01349 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 196 IPR036638 GO:0046983
Mepo6g01349 214 Coils Coil 22 42 - -
Mepo6g01349 214 CDD bHLH_AtIBH1_like 135 190 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01349 Mepo-Chr6 14728169 14729469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01349 43 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 54.913 3.44e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01349 - - gmx:100792237 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01349 6 14728169 14729469 Mepo6g01349 6 14728169 14729469 ECH
Mepo1g00667 1 6425398 6426605 Mepo6g01349 6 14728169 14729469 PCT