Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01347 ATGGAGGAGGAGAAGAGAGAGGAGCACATAAACCCCACCAACTCATCATCCACCACCACCACCACCATGGCATTCTCCGATGAGATTCCAACAACCACCACCACCAACAACAACACATCTTTATTCCCTTTTCAACCTTCAATCTCTACCTTCTTTGACACCATGACATCTTCCTCTTGTGACCAAAAATCTTCTTCTTTTGGGTTCATGGACTTGTTGGGTTCCCATGATTACATGAACAACAACAGCACTTTTTTATTATCAGATTGGGTTCCCACCGTCGCCACAACAACAACAACAACCCACCACACTCTTCCGTCACCGGGGAGTTCTAACATCCCGGACTCATCCGAGGTGTTGAACACTCCGGTGTCACCGAATTCTTCTTCGATTTCTTCCTCGTCTAACGAAGCCACAGTTAACAACACCTTAGAACATCATAGAGGTAAGCTTTCAAAAAACGAAGCAGAGTTAGAAGGAGATGACCAAGATGAAGAAGACAAGACTAAGAAACAATTAAAAGCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCATCTAGATGATGGTTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCTATTGTCGTCACTACTTACGAGGGTCAACACACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTCGTTCACCAACCTACTAGCTTCGGTGCTTCACACTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATACTACTACTACACCCCCTTCTTCTAGTTATGTTGGTGGTTCTAGTGGTAGTTATGTTAACACGTCGTCGTTTGGTGGTTTTGTGAATGACCAAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGACAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAACAAGAAAAAGATTCAATCAAAGAACAACATTAA 1083 0.4275 MEEEKREEHINPTNSSSTTTTTMAFSDEIPTTTTTNNNTSLFPFQPSISTFFDTMTSSSCDQKSSSFGFMDLLGSHDYMNNNSTFLLSDWVPTVATTTTTTHHTLPSPGSSNIPDSSEVLNTPVSPNSSSISSSSNEATVNNTLEHHRGKLSKNEAELEGDDQDEEDKTKKQLKAKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSFVHQPTSFGASHSHSHFLLPTLLYNTTTTPPSSSYVGGSSGSYVNTSSFGGFVNDQGFGSSGFVNEALLRDNGLLQDIIQMKKQEKDSIKEQH 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01347 360 Gene3D WRKY domain 184 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01347 360 SMART WRKY_cls 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01347 360 ProSiteProfiles WRKY domain profile. 194 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01347 360 FunFam WRKY transcription factor 57 185 259 - -
Mepo6g01347 360 Pfam WRKY DNA -binding domain 200 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01347 360 SUPERFAMILY WRKY DNA-binding domain 191 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01347 360 MobiDBLite consensus disorder prediction 143 157 - -
Mepo6g01347 360 MobiDBLite consensus disorder prediction 1 23 - -
Mepo6g01347 360 MobiDBLite consensus disorder prediction 99 186 - -
Mepo6g01347 360 Coils Coil 163 183 - -
Mepo6g01347 360 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 276 IPR044810 GO:0003700
Mepo6g01347 360 MobiDBLite consensus disorder prediction 99 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01347 Mepo-Chr6 14681442 14683694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01347 169 352 WRKY Transcription Factor Family AT2G47260 54.229 8.29e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g01347 WRKY 1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01347 - - mtr:11408791 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01347 6 14681442 14683694 Mepo6g01347 6 14681442 14683694 ECH
Mepo6g01347 6 14681442 14683694 Mepo1g00666 1 6385860 6387899 PCT