Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01322 ATGCATTCAACACAAAGAAGACCCAATAAACAGTTAAAGGAAAAGGAGGACTACATTGATGTTGTTGGTGACGCTGTTGATGCTTGTTGGGTCCCACCTCTCCTTCATCCACAGGATAAACCACCACATGAGATAAAGAAAAAGCCTAAAGTTAAAATCAAATTCAAATTTACAGGGAAGCCAAAAAATGAGCCAAAGTTTAAAAAGGGGGAAATAGTCGAAGTTACCAGCGACGATGAAGGTTACAAAGGTGCTTGGTTTGTTGCTACTATTATTGACACATTAGAAAATGAAAAGTTTTTAGTTGAACATAGAGACTTGTTGATGAATGATGGTGGTATTGATGTTCTGAAAGAAGAAATTGAAGCTAAGTTTATTAGGCCTTGTCCTCCTCATGTTCCAATGTTTGGTTCTTTAAAAAGGTTACAAGAAGTTGATGCATGGTATAATGATGGATGGTGGGAAGGCATGGTTGTTGAATTGGTGAATAGCGAAGAGTGTTACGTTCGTTTTAGGAACAATGAAGTATTAAAATTTGAATCTTCGAAGTTAAGACCGCATCAGGATTGGATTGATGGAAAATGGATTATGTCTTCCAAGGAGTCAAGTGAGCCAGTGAAGAAATTTGGAGATGTGATACATGAAACCAAGAATCTAGCTGGAACAAAATTAATTTTGAAAGGCCCAATTCCTAGTGAGAGTGCAAAGCATAAGAGAGATATGATAAGCACTATATATAATGGAAGCAAATTTGATTTACATTTCTATAAAGGGGCAAATGTAGAGGTTAAAAGTGATGAACAAGGCTATGAAGGTTCATGGTATCCTGCAATTGTTGTTGATTTATATCAAAATGGAAAGTACTTGGTGGAGTATGTAACTTTGAAAACAGATGACTTAACTCAACAGCTGAAAGAAGTGGCAGATGTTTCAGATATCAGACCGCGTCCACCAGATATCGATCATTTTTGTCGATATGTGAGGCAGGAATGGGTTGATGCTTGGTATAATGATGGATGGTGGGAAGGTGTAGTATCTAGTGTTGGTCATGGTTTAAATGGTTTCAAGTATGAGGTTTACTTTTGGACTTCAAATGAGGTGCTGGAATTTGAACATAATCATCTAAGGCCTCATCAATATTGGATTGATGGAAGATGGGTGCTTGCTTCTTTGGTATGA 1179 0.3723 MHSTQRRPNKQLKEKEDYIDVVGDAVDACWVPPLLHPQDKPPHEIKKKPKVKIKFKFTGKPKNEPKFKKGEIVEVTSDDEGYKGAWFVATIIDTLENEKFLVEHRDLLMNDGGIDVLKEEIEAKFIRPCPPHVPMFGSLKRLQEVDAWYNDGWWEGMVVELVNSEECYVRFRNNEVLKFESSKLRPHQDWIDGKWIMSSKESSEPVKKFGDVIHETKNLAGTKLILKGPIPSESAKHKRDMISTIYNGSKFDLHFYKGANVEVKSDEQGYEGSWYPAIVVDLYQNGKYLVEYVTLKTDDLTQQLKEVADVSDIRPRPPDIDHFCRYVRQEWVDAWYNDGWWEGVVSSVGHGLNGFKYEVYFWTSNEVLEFEHNHLRPHQYWIDGRWVLASLV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01322 392 CDD Tudor_Agenet_AtDUF_rpt1_3 67 131 - -
Mepo6g01322 392 CDD Tudor_Agenet_AtDUF_rpt2_4 142 186 - -
Mepo6g01322 392 CDD Tudor_Agenet_AtDUF_rpt1_3 255 318 - -
Mepo6g01322 392 Gene3D - 247 322 - -
Mepo6g01322 392 SMART agenet_At_2 324 383 IPR014002 -
Mepo6g01322 392 SMART agenet_At_2 137 192 IPR014002 -
Mepo6g01322 392 SMART agenet_At_2 65 134 IPR014002 -
Mepo6g01322 392 SMART agenet_At_2 253 321 IPR014002 -
Mepo6g01322 392 CDD Tudor_Agenet_AtDUF_rpt2_4 332 377 - -
Mepo6g01322 392 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 60 204 - -
Mepo6g01322 392 Pfam Agenet domain 258 318 IPR008395 -
Mepo6g01322 392 Pfam Agenet domain 70 131 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01322 Mepo-Chr6 14460265 14462219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01322 264 392 PHD Transcription Factor Family AT5G58610 27.564 2.39e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01322 - - cam:101492247 486.493