Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01318 ATGCAACCAAATGAGATCATTGAAGTAGAAAATGTTATGCTCAAATTCAACCCCACCACCGTTATTCACATTCCCACCATCACTACCCTCACCACCCCCACTATCATTACCCCAATTACCACTACCACCACCTTCGCTAACCCCACCAGCACTATTAGCACTGCCACTACTACTCCTACCATCTCTACTCCTAACACTATCATGACAAACACTAGCGTTCATGAAACCAATCAATATCCTTGTGTTTGTGATTTTTCAACACCCATTGAACAACAACAGTTTCATCAAAGCAACAACAATCAAGTGTTTTTTACGAAACATGTTGCCCGCATTGAAATCATAACCGCTCATTTTGATCATGCATACAACCATCCATCTAGTCCACAACATACACAAAGAAGCAATCAACTTCCAATTCTACAAACCCAAACTAGTTCTAGGGTTTTACCAAACACATATCCACAACAATCAAACCTCAGATCAAGAAAAAGAAAAAAGAATACCAAGATGTCATTGGTGTGTTATATGAGGGAAGATAAACTTTCAACAGACTCATGGGCATGGAGTAAACATGGACGAAAATTCATTAAACGGTCTCCACATCCAAGGTGCTATTATAAGTGTAGTAGTTTCGCAAATTGTCCAGCAAGAAAATATGTAGAGAAAAGCAAAACTCATGAGAACGCTTATATTGTGACGTATAAAGGAGAGCATGATCACCAAAAACCAAAAGAAATTAAGAACTTTGTTGTTGGTACCTCCCAAAACAAGTCATCAAAGACTAGATTATCTACTGCTGAAGAATCTGGATCATCTCCAAATGTCAAAAATTTGGGTTTGCCTAATGTGGTGACGTTGGAGTTTAATCATCCGGAGATGCTCGGGTTCTCGCTGATAAATCAAAAATCCCTTATTCGGAAATGGAACTTATAG 933 0.3869 MQPNEIIEVENVMLKFNPTTVIHIPTITTLTTPTIITPITTTTTFANPTSTISTATTTPTISTPNTIMTNTSVHETNQYPCVCDFSTPIEQQQFHQSNNNQVFFTKHVARIEIITAHFDHAYNHPSSPQHTQRSNQLPILQTQTSSRVLPNTYPQQSNLRSRKRKKNTKMSLVCYMREDKLSTDSWAWSKHGRKFIKRSPHPRCYYKCSSFANCPARKYVEKSKTHENAYIVTYKGEHDHQKPKEIKNFVVGTSQNKSSKTRLSTAEESGSSPNVKNLGLPNVVTLEFNHPEMLGFSLINQKSLIRKWNL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01318 310 SUPERFAMILY WRKY DNA-binding domain 175 243 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01318 310 MobiDBLite consensus disorder prediction 141 158 - -
Mepo6g01318 310 Gene3D WRKY domain 167 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01318 310 MobiDBLite consensus disorder prediction 141 165 - -
Mepo6g01318 310 SMART WRKY_cls 182 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01318 310 MobiDBLite consensus disorder prediction 253 274 - -
Mepo6g01318 310 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 77 270 IPR044810 GO:0003700
Mepo6g01318 310 ProSiteProfiles WRKY domain profile. 177 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01318 310 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01318 Mepo-Chr6 14333753 14335648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01318 160 258 WRKY Transcription Factor Family AT5G52830 50.505 4.14e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g01318 WRKY 2.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01318 - - tpra:123905881 248.054