Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01312 ATGGTGTTGGAAACTGAAATCATTTATCAACAAAGCGTGTTGGATGTTAAGTATCATCTCTGCGTTTCGTCTGAATCTGTTTCAACTGAAAAGTCTCTCTTTGAATCGACTGTGAGTTGCTCAGAGGTGATTACAGAATCAATTATAGAGGATGCTGTTGCAATGTTTACCCCAAAGGTTCGTTCTGGTAGCTGTGCTGATATTGGTCCGAGGGGATCAATGGATGATGAACACATTCAAATAGATGATCTAGCTGCCCATCTTGGATTTGTGTTGAAATACCCTACACCGAGTGCTTTTTATGCTGTTTTTGATGGACATGGAGGTCCTGATGCAGCTGTGTTTGTTAAGAACAATGCTATGAAATTATTTTTTGAAGATACTACTATGCTGGAAACTTATGACTCTGATGCACTTCTGCTGAAGAGGTTGGAAGATTCTCATCGGAAAGCTTTTCTAGGTGCTGACCTTTTATTGGCTGATGAGCAGAGTATTAGTAGTTCCTGTGGGACAACAGCTCTGACTGCCCTTATACTTGGAAGGCATTTGCTGGTTGCTAATGCTGGTGATTGTCGAGCAGTTCTTTGTAAGCGTGGAGTAGCTGTTGACATGTCTCAAGATCATAGACCAAGTTATTTACCAGAACGTAAAAGAGTTGAAGAGTTGGGTGGTTATATTGATGATGGATATCTCAATGGTTATCTTTCTGTCACTCGTGCCCTTGGTGATTGGGACTTAAAATTACCACTCGGTTCCGCCTCACCTCTTACTGCTGAGCCCGATGTTCAGGTGGTCACATTGACCGAGGGAGATGAGTTCTTGATCATTGGGTGTGATGGCATCTGGGATGTAATGTCAAGCCAGGATGCAGTTAGTCTTGTCCGTCGTGGATTAAGAAGGCACGACGACCCACAGCAAAGTGCCAGAGAGCTTGTCAAAGAAGCATTGCGCCTACACACAACAGATAATCTTACTGTAATTGTCATCTGCTTGTCTGCTGTCGAAAGCATTGTTGAATCGTGTCCACCCCATAGGCGAAGATTTAGAGCTTGCTCTATGTCCGAAGAGGCTAGAAACAAATTGAGGAGCTTGCTAGAAAGTAACTGA 1107 0.4318 MVLETEIIYQQSVLDVKYHLCVSSESVSTEKSLFESTVSCSEVITESIIEDAVAMFTPKVRSGSCADIGPRGSMDDEHIQIDDLAAHLGFVLKYPTPSAFYAVFDGHGGPDAAVFVKNNAMKLFFEDTTMLETYDSDALLLKRLEDSHRKAFLGADLLLADEQSISSSCGTTALTALILGRHLLVANAGDCRAVLCKRGVAVDMSQDHRPSYLPERKRVEELGGYIDDGYLNGYLSVTRALGDWDLKLPLGSASPLTAEPDVQVVTLTEGDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPQQSARELVKEALRLHTTDNLTVIVICLSAVESIVESCPPHRRRFRACSMSEEARNKLRSLLESN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01312 368 SMART PP2C_SIG_2 76 331 IPR001932 -
Mepo6g01312 368 Gene3D - 46 336 IPR036457 -
Mepo6g01312 368 ProSiteProfiles PPM-type phosphatase domain profile. 61 331 IPR001932 -
Mepo6g01312 368 SUPERFAMILY PP2C-like 53 332 IPR036457 -
Mepo6g01312 368 SMART PP2C_4 51 329 IPR001932 -
Mepo6g01312 368 CDD PP2Cc 60 331 IPR001932 -
Mepo6g01312 368 Pfam Protein phosphatase 2C 70 323 IPR001932 -
Mepo6g01312 368 FunFam Probable protein phosphatase 2C 22 45 334 - -
Mepo6g01312 368 Coils Coil 354 368 - -
Mepo6g01312 368 PANTHER PROTEIN PHOSPHATASE 2C 50 329 IPR015655 GO:0004722|GO:0006470
Mepo6g01312 368 ProSitePatterns PPM-type phosphatase domain signature. 100 108 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01312 Mepo-Chr6 14246502 14248927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01312 1 365 PP2C-type Phosphatase Gene Family AT1G48040 57.513 2.03e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01312 K14803 - gmx:100798957 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01312 6 14246502 14248927 Mepo6g01312 6 14246502 14248927 ECH
Mepo1g00636 1 6099482 6102051 Mepo6g01312 6 14246502 14248927 PCT