Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01289 ATGGTTAACTCAAAGCCTAATATCAACATTGTCTTTATCGGTCATGTCAATTCTGGGAAGTCAACTACTGCCGGTCATTTGCTTTACAAGCTTGGAGGTATTCAAAAGAGTGTCATTGAGGCACTTGGGAAAGAAGCTGCTGAGATGAAGATGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGTATCACAATTGACATTTCTATGTGCAAGTTTGAGACAACCAAGTACTGTTGCACCCTCATTGATGCCCCCGGACACAGGGATTTCATTAAGAACATGATCACCGGGACCTCCGAAGCTGACTGTGCTGTTCTAGTCATCAATTCCACTGCTCTCGGTTTGCGAGCTGGTTGGTCTAAGGATGGTCAGACCTGGGAACATGCTCTACTTGCGTACACTCTTGGTGTGAGGCAAATGATCTGCTGCTGCAACAAGGCAGCGACAAAGATGACCGGTTCCACGACTGATCAGAAAGATGATGCTGAAACTTCATCAAAGAAAAGAAAAGAAGGACCATTTGAAACAGTTTCTGATGAAACGCCATCCAAGAAAATAAAAGAAGGACATTCTGAAACAATTACTCCGAAGGGTTCTTACGTGCACCAGGGAGAATTTGAGAGGCTTCCTTTATATGCATCAGGTCTAGTTATTGGTGATGACGAGCTTCTTCATCGCAAAAATCTGCAGATGGGAACATGA 726 0.4435 MVNSKPNINIVFIGHVNSGKSTTAGHLLYKLGGIQKSVIEALGKEAAEMKMRSFKYAWVLDKLKAERERGITIDISMCKFETTKYCCTLIDAPGHRDFIKNMITGTSEADCAVLVINSTALGLRAGWSKDGQTWEHALLAYTLGVRQMICCCNKAATKMTGSTTDQKDDAETSSKKRKEGPFETVSDETPSKKIKEGHSETITPKGSYVHQGEFERLPLYASGLVIGDDELLHRKNLQMGT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01289 241 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 PRINTS GTP-binding elongation factor signature 148 157 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 MobiDBLite consensus disorder prediction 164 200 - -
Mepo6g01289 241 Pfam Elongation factor Tu GTP binding domain 6 171 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 Gene3D - 1 157 IPR027417 -
Mepo6g01289 241 PANTHER TRANSLATION FACTOR 5 157 - -
Mepo6g01289 241 MobiDBLite consensus disorder prediction 160 207 - -
Mepo6g01289 241 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mepo6g01289 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 155 IPR027417 -
Mepo6g01289 241 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 241 IPR000795 GO:0003924|GO:0005525
Mepo6g01289 241 FunFam Elongation factor 1-alpha 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01289 Mepo-Chr6 14043307 14045330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01289 1 186 Eukaryotic Initiation Factors Gene Family AT1G07930 67.526 2.68e-84 254