Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01280 ATGTGTAGTATCTTTGTTTCATCAACAAGTATGGACAATTACCTAGGTGATTTAACTGACATAATCAGAGGTGGTACTGCTGGAGCATATAGTAGTACTGGAACTTCATCATCATCTGCTGAACCTGCAGTTTCACATCATCATGATCATGATAATCAGTGGAATCATCATCATCATCATCATCATCATCAACATAATCATCAATTCTCTTCTGATCATCATTATCATCACCCTTTGAGTTTCTCTTCTGTTCTTGAAGACAATAGAGGGGGAACAAACATGAACATGTTTGGTGATCCATTATTCTCAACTTTAAGAGATCCATTTTTACAAGAACTTGATCATATACCTTCTTCTTCCTACTTCAACATCACAAGTACTACTAGTACTACTTCACCTGCTACTATAATTGATGTTGCTTCTTCTGGTGTTAGTGTTACTACTTCATCATCTTCTTCTGCTTCTGTTTTTGCACTTGATGAGATGAGATCAATATCAAGACCATGTAAAAACATATTCTCAAATATGATTCAGATCTCTCCTAATCCAAAGTTACCTAATTATGAATCTTCTTCAACAATAGCAGCACCTTCTCCAAGACCAATTAAACCTTCTGCTGTTATTTCAACCAACATCAATATTAATGCTAAGGATTCTCTTCTAGACAACACAGGAGTTCAGATCTCATCTTCCAGGAATACAGGTCTTAAACGAAGGAAGAATCAAGCAAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAATAGTAGACAAACTGGAGAAGTAGTTCCTTCAGATTTGTGGGCTTGGAGAAAATATGGTCAGAAGCCTATTAAAGGTTCACCTTATCCAAGGGGTTATTATAGATGCAGCAGTTCAAAGGGATGTTCAGCTAGGAAACAAGTTGAGAGAAGCAGAACAGATCCAAACATGTTGGTTATAACCTACACTTCAGAACACAATCATCCATGGCCAACACAGAGAAATGCCTTAGCAGGTTCAACAAGATCTCAACCATCCAAAAACAATACTTCTATAAAGAATTCAGAAACTTCTCAGCCACAAAATGACACAACAAAGCCAAAAGAAGAACAAGAGAACAATAATAACAGTGATGGAAATGATTCTCCAGTTGTTAACAATGTGAAGGAAGAGAATATGGAAGATATAGAGAAGCTACAAATTGAGATGGATGAAGGAGAATTCAGTGATGGACTTTCTTATAAGGTGATGGAAAATAGCAAAATTCATGAGGATTTTTTTGCTGAATTGGGTGAAATTGAAACTGATCCATTAAACCTATTGTTTAATCAAGGTTTTGGTGGTAATTCAAGTAATGATAGGGATCAATCATCCAAGGGTTTAGATCCATTTCATCTCTTTGACTGGTCAGGTGATAACAACAATACCAACAACTCATTTGAAGAACCAAATAAGAGAAGGCTATGA 1452 0.3629 MCSIFVSSTSMDNYLGDLTDIIRGGTAGAYSSTGTSSSSAEPAVSHHHDHDNQWNHHHHHHHHQHNHQFSSDHHYHHPLSFSSVLEDNRGGTNMNMFGDPLFSTLRDPFLQELDHIPSSSYFNITSTTSTTSPATIIDVASSGVSVTTSSSSSASVFALDEMRSISRPCKNIFSNMIQISPNPKLPNYESSSTIAAPSPRPIKPSAVISTNININAKDSLLDNTGVQISSSRNTGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNTSIKNSETSQPQNDTTKPKEEQENNNNSDGNDSPVVNNVKEENMEDIEKLQIEMDEGEFSDGLSYKVMENSKIHEDFFAELGEIETDPLNLLFNQGFGGNSSNDRDQSSKGLDPFHLFDWSGDNNNTNNSFEEPNKRRL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01280 483 MobiDBLite consensus disorder prediction 52 70 - -
Mepo6g01280 483 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01280 483 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01280 483 MobiDBLite consensus disorder prediction 444 483 - -
Mepo6g01280 483 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01280 483 MobiDBLite consensus disorder prediction 282 382 - -
Mepo6g01280 483 FunFam probable WRKY transcription factor 14 239 319 - -
Mepo6g01280 483 MobiDBLite consensus disorder prediction 309 357 - -
Mepo6g01280 483 SUPERFAMILY WRKY DNA-binding domain 263 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01280 483 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 445 IPR044810 GO:0003700
Mepo6g01280 483 Gene3D WRKY domain 239 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01280 483 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01280 Mepo-Chr6 13941927 13945123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01280 1 483 WRKY Transcription Factor Family AT1G30650 40.514 4.74e-87 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g01280 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01280 - - aprc:113852911 542.732