Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01225 ATGGACTTAACCTTGAGATTAGCGCCACCTGAGAATCCTTGCAGAAACAAAGAAAAAGGAGCCTATCCTCGTCATTCTGCTGCTCAAAGATCTAGGCTCGAAGAAATATTTCAAACGCTCAAATATCCAACTCATAAGCAAAAAAGTGAAATAGCCGAAGAGCTTGGTCTTGAGCCAAAACAAGTGAACTGGTGGTTTACATACAAAAGAGGTCGGGTTAAGATTGCTAGTAAAAAGGAAGTTAACGCTGCTCTTCGAGCTGAAAATGAAATGCTTTTGGAAGAGGAAATGGAAATGGAGAGACGAAATAGTGTATCTTGCCAAGCATGCCGTGATTCACGTTTGAAACAACTTCGGCTTGAAAATGAACTTCTGAAAGAAAAGCTGTCAAAATTGGATCCACGACAAATGGGAAAAGAGGAACTATCACTGGAGTTGAAGTTAGGTCTTCCCATGAGATCGTCAGATGGAACCTATCTTTAG 483 0.4079 MDLTLRLAPPENPCRNKEKGAYPRHSAAQRSRLEEIFQTLKYPTHKQKSEIAEELGLEPKQVNWWFTYKRGRVKIASKKEVNAALRAENEMLLEEEMEMERRNSVSCQACRDSRLKQLRLENELLKEKLSKLDPRQMGKEELSLELKLGLPMRSSDGTYL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01225 160 MobiDBLite consensus disorder prediction 1 26 - -
Mepo6g01225 160 Pfam Homeodomain 24 74 IPR001356 GO:0003677
Mepo6g01225 160 SUPERFAMILY Homeodomain-like 19 81 IPR009057 -
Mepo6g01225 160 SMART HOX_1 18 80 IPR001356 GO:0003677
Mepo6g01225 160 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Mepo6g01225 160 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 132 IPR042160 -
Mepo6g01225 160 Coils Coil 75 102 - -
Mepo6g01225 160 Gene3D - 8 94 - -
Mepo6g01225 160 CDD homeodomain 24 74 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01225 Mepo-Chr6 13305778 13308263 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01225 11 132 Homeobox Transcription Factor Family AT1G05230 32.824 9.30e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo6g01225 Homeodomain 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01225 K09338 - mtr:11417442 166.007