Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01224 ATGTTGGTGGCTGGACTTGCCGCCATGGAAGGGTTGGTTAAGCTTTTCTGTGATGAGTTTTTCTGGGTCAAGTCTCGTCTTAATCAAAGACCTGTTCTTCAACAAAGAAACTATGAAGATGTCTTCACGAGAGTTTATCACTTTAATGGCGCCGAAACACATGAAAAATGGGCAAATCTTTTCCCAACTATTGTCAACAAAGCAGAGACCATGAAAGTGCTTGAAAGGGACTCCTCACAAAATCAAAGTGGAGCTTTATTGTTGATGCATGAAGAAATGCATGTTCTTTCACCTTTAGAGAAACCAAGAGAATTTTACTTCCTTCGCTATTGTGTACAAGTTGAAGCTGATATATGGGTGATTGCTGATGTTTCTTATGATTACTTGAAAGAGGATGGACCTCATTCTTCTTATTGGAGGTTTCCTTCTGGATGTTTGATTCAACATATATCTACTGAGACTTCCAAGGTTTCTTGGATTGAGCATGTGGAAGTGGATTTGAAGATTCAAACACATAGTATGTATAGAGATATTGTCAACAATGCTATTGCATTTGGAGCCCAAAGATGGCTCATGGAACTTCAAAGAATTGGTGAAAGATGTGGTAGTGCTGCACTTGAATATATGCATTTTTATGACAATGGAGTGGTGGCATTACCAGAAGGATGGAGAGGTGTAATGAAACTTGCACATCATGTGGTTAAGGAGTTCAGTAAAAATTTAACAATGAAATCAGATTTACCACAATACTTTGCTGATGCTGATGATATCGGGGTTAGGTTTTCGATTCAAAAAAATAGAAATTTATTTCTGTCAAAAGACCCATTCATTGTTATTGTTGCTAGCTCCGTTTTGATACCTCTCCCATCTCATATTGTTTTCGACTTCTTAAGAGATCCTGCAAGACGTTTTGAGCCTCTAGTGTCGCCTCCCAAAGATGGTGTGAAGATTATTCAAGAATGTTTCATAGATCCTTTGGGATCCTATGTTGTTTATTCTCCTGTAAACACACAAGAGTTGAATATGGCAATGAGTGGCCATGATTTATCAAATGTGTCACTTATAATTCCATCAGGCTTTTTCATCTCTGAAGATAGTAAATCTCTTTCAAAAGATAGTAAATCAAGAGGTTCATTGCTGACAGTGGCTTTTCAAATGCACATGCCTTGTCCTTTTATTGCAAATTTTGAATCTGCAGCTGATGCTTCAAATGCACTCATGACAACAGTAGTTAAAAGCATAAAACATGCTCTACTTAATTAG 1263 0.3745 MLVAGLAAMEGLVKLFCDEFFWVKSRLNQRPVLQQRNYEDVFTRVYHFNGAETHEKWANLFPTIVNKAETMKVLERDSSQNQSGALLLMHEEMHVLSPLEKPREFYFLRYCVQVEADIWVIADVSYDYLKEDGPHSSYWRFPSGCLIQHISTETSKVSWIEHVEVDLKIQTHSMYRDIVNNAIAFGAQRWLMELQRIGERCGSAALEYMHFYDNGVVALPEGWRGVMKLAHHVVKEFSKNLTMKSDLPQYFADADDIGVRFSIQKNRNLFLSKDPFIVIVASSVLIPLPSHIVFDFLRDPARRFEPLVSPPKDGVKIIQECFIDPLGSYVVYSPVNTQELNMAMSGHDLSNVSLIIPSGFFISEDSKSLSKDSKSRGSLLTVAFQMHMPCPFIANFESAADASNALMTTVVKSIKHALLN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01224 420 ProSiteProfiles START domain profile. 48 203 IPR002913 GO:0008289
Mepo6g01224 420 SMART START_1 2 200 IPR002913 GO:0008289
Mepo6g01224 420 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 418 IPR042160 -
Mepo6g01224 420 SUPERFAMILY Bet v1-like 55 201 - -
Mepo6g01224 420 Gene3D - 33 198 IPR023393 -
Mepo6g01224 420 Pfam START domain 52 199 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01224 Mepo-Chr6 13299884 13302735 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01224 1 418 Homeobox Transcription Factor Family AT1G17920 33.888 2.30e-67 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01224 K09338 - mtr:11417442 447.973