Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01223 ATGGAATTAACCTTGAGATTAGCGCCACCTGAGAATCCTTGCACAAACAAAGAAAAAGGAGCTTTTCCTCGTCATTCTGCTGCTCAAAGATCTAGGCTCGAAGAAATATTTCAAATGCTCAAATATCCAACTCATAAGCAGAAAAGTGAAATAGCCGAAGAGCTTGGTCTTGAGCCAAAACAAGTGAACTGGTGGTTTACATACAAAAGAGGTCAGGTTAAGAATGCTAGTCAAAAGGAAGTTAACGCTGCTCTTCGAGCTGAAATTCAAATGCTTTTGGAAGAGAAAAGGGAAATGGAGAGACATGATAATGTAGTTTGCCAAGCATGCAGGGATTTACAACTTCGGCTTGAAAATGAACTTCTGAAAGAAAAGGTGAGTTGGTATAACTACACATAA 399 0.391 MELTLRLAPPENPCTNKEKGAFPRHSAAQRSRLEEIFQMLKYPTHKQKSEIAEELGLEPKQVNWWFTYKRGQVKNASQKEVNAALRAEIQMLLEEKREMERHDNVVCQACRDLQLRLENELLKEKVSWYNYT 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01223 132 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Mepo6g01223 132 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 126 IPR042160 -
Mepo6g01223 132 CDD homeodomain 24 66 IPR001356 GO:0003677
Mepo6g01223 132 Gene3D - 8 94 - -
Mepo6g01223 132 SMART HOX_1 17 80 IPR001356 GO:0003677
Mepo6g01223 132 Pfam Homeodomain 25 74 IPR001356 GO:0003677
Mepo6g01223 132 MobiDBLite consensus disorder prediction 1 25 - -
Mepo6g01223 132 Coils Coil 75 102 - -
Mepo6g01223 132 SUPERFAMILY Homeodomain-like 13 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01223 Mepo-Chr6 13287662 13289528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01223 11 126 Homeobox Transcription Factor Family AT1G05230 33.594 9.55e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo6g01223 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01223 K09338 - mtr:11417442 207.994