Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01219 ATGAAAGAGGAATTGAAGAATAAGATATCATGCAGTGGTTCGTATCGTAAGAATCATGAAGATTATGAAAACTCCATGCGACAACTTCAACTTAAAAATGCTCGTCTCAAAGAAGAGACTCAAAATGAGAAAGCAACTGGCTCTGCACTTCGCACGGAGAATGAAAGGCTTTTCAATAAGAACAACCAAATGAAAGAGGAATTGAAGAATAAGATATCATGCAGTGGTCCATATTGTAAGAATCATGAAGATTATGAAAAATCCATGCAACAACTTCAACTTGAAAATGCTCGTCTCAAAGAAGAGCATGAGAGGATGTCAAAATTTATTGCTACACATATGGAGAAAATTCCTGTTGTTTCGGATGAAAATATTTTGGTCAAACCAACATGCAGAAGAACAGAAATGGAAAAAATAATGATGTTGGAAGTTGCAATTGCAGCAAAAGAAGAGTTACTTAAGCTCTTAAGCACCAATGACCCCTTATGGGTTAAGTCTCACGTTGATCAAAGACTTGTTCTTCATCAAAAAAATTATGAGGATGTATTTCCTATTATTGATCATTTCAACGGTGCTAAAACAAGAGTTGAATCTTCTAAAGATTCAAAATCAATCAGATTTGGAGCAAGGCATTTGGTTAAATTGCTTTTGGATTCGGAAGATTGGAAAACTCTTTTCCCAACTATTGTTACAAAAGCGGAAACAATTGAAGTGCTTGAAGAAGGTTCTTCAGAAAATCGAAGTGGAGTTTTACAATTGATGTATGAAGAGATGCATGTTCTTTCACCTTTTGTGCCATCTAGAGAATTTTACCTTCTTCGCTATAGTGAACAAGTTGAAGCTGGTACTTGGGTGATAGCTAATGTTTCATGGGTTGAACATGTGGAAGTCGTTGACAAGATCCAAACACACCGTCTCTATAAAGATGTTGTCAATCTCACAATTGCATTTGGAGCAGAAAGACGACTTTTAGATCTTCAAAGAATGTCTGAAAAGTTTTCTAGACTGAAAAACATATCTATTTATGATAGCGGAGTGGTTACTTTACTCAAAGGAAAGAAGAGTGTGGTGCATCTGTCTCATCGAATGGTTAAGGACTATTGTAAAATTTTGTCCCTGTTAAGAAAGTCAAACATCCCACAATCCTTAGCTGATGTTAATGATAGCAAGATAATGCTTGCTATTAGAAAAAGTGGGGTCCTGTTTAAACCAAACAACAATGGCACTTTTATGGTTGCTACCTCAGTGTTGTTTCCTTTCCCATCTCAGATGTTGTTTGACTTCTTAAGAGATCCTGCAAGACGTTTTCAGTGGGATGATAATTATCAAGGAAATCCAATGCATGAGATTGCACACATTTCAACTGGGGGTGACTCAAACAATTATATTTCAATTATTCAGCCTATGGAACCTCCTCCCCCAAACGGTGTGGTGATCATTCAAGAATGCTTCATAGATCCTCTGGCATCTTATGTTGTGTTTTCTCCTTTAAATATACCGGATTTAAAGGATTCCATCAATGGTAAACCTTCATCAACAATGTCACTTCTTTCCTCTGGCTTTATCATCTTCAACGACAGTCAATCTCATTCGAGGAAAAATGCAAGAAGTTCTTTGTTGACCGTGGCTTTTCAACTATCGATGTCTAGTCTAGAAGGAGTGAATTTGGATGTTGTCGCTAAGTCATTCATGACCAAAACCATCAACAACATTAGAGATTCTTTAATTGTCTAA 1734 0.3651 MKEELKNKISCSGSYRKNHEDYENSMRQLQLKNARLKEETQNEKATGSALRTENERLFNKNNQMKEELKNKISCSGPYCKNHEDYEKSMQQLQLENARLKEEHERMSKFIATHMEKIPVVSDENILVKPTCRRTEMEKIMMLEVAIAAKEELLKLLSTNDPLWVKSHVDQRLVLHQKNYEDVFPIIDHFNGAKTRVESSKDSKSIRFGARHLVKLLLDSEDWKTLFPTIVTKAETIEVLEEGSSENRSGVLQLMYEEMHVLSPFVPSREFYLLRYSEQVEAGTWVIANVSWVEHVEVVDKIQTHRLYKDVVNLTIAFGAERRLLDLQRMSEKFSRLKNISIYDSGVVTLLKGKKSVVHLSHRMVKDYCKILSLLRKSNIPQSLADVNDSKIMLAIRKSGVLFKPNNNGTFMVATSVLFPFPSQMLFDFLRDPARRFQWDDNYQGNPMHEIAHISTGGDSNNYISIIQPMEPPPPNGVVIIQECFIDPLASYVVFSPLNIPDLKDSINGKPSSTMSLLSSGFIIFNDSQSHSRKNARSSLLTVAFQLSMSSLEGVNLDVVAKSFMTKTINNIRDSLIV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01219 577 Pfam START domain 143 290 IPR002913 GO:0008289
Mepo6g01219 577 Gene3D - 143 306 IPR023393 -
Mepo6g01219 577 Coils Coil 82 109 - -
Mepo6g01219 577 ProSiteProfiles START domain profile. 134 290 IPR002913 GO:0008289
Mepo6g01219 577 SUPERFAMILY Bet v1-like 134 333 - -
Mepo6g01219 577 SMART START_1 143 332 IPR002913 GO:0008289
Mepo6g01219 577 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 32 290 IPR042160 -
Mepo6g01219 577 SUPERFAMILY Bet v1-like 400 574 - -
Mepo6g01219 577 Coils Coil 19 67 - -
Mepo6g01219 577 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01219 Mepo-Chr6 13207726 13215838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01219 27 571 Homeobox Transcription Factor Family AT1G73360 31.620 5.93e-95 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01219 K09338 - gmx:100794552 474.167