Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01206 ATGATGGGGAAGGTTATTGAGGAGGGACTATTGTTTGTATTGATTTTGATGATTGTGAGCAAAAATGTAGAGGCTCAACAAAAATCAATTCTTATAAATTGTGGTTCAAATTCTTCTGTGAATGTTGATGGTAGGAAATGGATTGGGGATATGGCACCTAATAACAATGTTACCCTTAGTTCTTCTCCTGGTGTTGTTGCTTCCACTGATGGATTAAGTGGAAATTCAATCTATGAACCACTTTATAAAACAGCTAGAATTTTCACAGCTTCTTTGAATTACACAATCAAAGATGTTCATGGAAACTATTTTGTTAGGTTTCATTTATGTCCCTTTGAGATTGTGGACCACAATGTGAATGAGTCGTCTTTTGGTGTTGTTGTCAATGGTATGAAACTATTGTCGGAGTTTAATGTTCCGGGTAAGATATCTGAAAAGAATGTGAACCTGCAGAATTCTGGAAAGAATTCGAGTTCGTTCTGTTTGATCAAAGAGTATATTCTGGATGTCAATGATGGTATGCTTTTGATTGAGTTTCTTCCAAGTGGAAATTCGTTTGGCTTCATCAATGCCATTGAGATTGTTCCCGTTGTTGGCGAGCTTTTTGATGGTTCGGTTGGTAAAGTTGGCGGTGGAAACTTGAATTTGACTGGACATGGGATGGAGACTATGTATAGGTTAAATGTTGGTGGCCCTGAGATTCAATCCAATCAGGATCCGGATCTTCGGAGAATTTGGGAAGTTGATTCTAGCTATATGGTCACGGAAAACGCCGGTGCAGCAATTAAGAGCAGCTCTAATATTACGTATGCTTCTGCGAATGATACTTCAGTGGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCAAACACAGAAGTCTTGGACAAAAGATTTAACATGTCATGGAAGTTTGAAGTAGATCCTGATTTTGATTATGTTGTCCGGTTACATTTCTGCGAGCTGATGTATGATAAGTCGAACGAGAGAATATTCAGGATCTACATAAACAACAGAACAGCTGCGGATAATGTTGATGTTTTTGTTCGAGCAGGAGGGAAGAATAAAGCGTATCATCAGGATCATTATGATTCCGCATCATTGAGGATGGACACATTTTGGGTTCAACTAGGTCCTGATACGGCTGCTGGTGCTGCAGGAACCGATGCTCTCTTGAATGGTCTAGAGATTTTTAAGCTTAGCAGAAATGGGAATCTCGCCTATGTGGAGAAATTTGACTTGGCCGGGAAATCGGGAAGCAGTTCAAAAGCAAAAGTTCTTTGGATTGGAGTAGGAGCAGGTATTGCTTCTGTAGCTATAGTTGCATGTGTTGGTGTCTTTGTTTTCTGTTTCTGCAAAAGAAGGAGAAAAGAATCAAGTGATACCAAAACAAACTCTCCTGGTTGGCGACCGATATTCCTTTATGGAGGGGCTGCTGTAAATAGCACTGTAGGTGCCAAGGGATCAACAGGAAATCAAAAGTTATATGGTACTGTCACCTCAACAGGTGCTGGTAAGCGGTTTACATTGGCTGAAATCAACGCTGCAACAAATAATTTCGACGACAGTTTGGTCATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGAGAGGTTGATGATGGTGTCCCCGCTGCAATTAAGCGCGCCAATCCACAGTCTGAACAAGGTCTGGCTGAATTTGAGACAGAAATTGAGATGCTCTCAAAACTAAGACACAGGCATCTTGTGTCTTTGATTGGTTTCTGTGAAGAGAAAAGTGAAATGATTTTGGTTTATGAGTACATGGCAAATGGAACTCTAAGAAGTCATCTATTTGGGAGCGATCTCCCTCCACTAACTTGGAAGCAGCGTCTTGAAGCCTGCATAGGTGCTGCAAGGGGACTTCACTACCTTCACACAGGAGCCGACCGTGGAATAATTCACCGGGATGTCAAGACAACCAATATATTGTTAGACGAGAATTTTGTAGCAAAAATGGCTGATTTCGGTTTGTCAAAAGACGGTCCTGCTTTTGAACATACTCATGTTAGCACTGCTGTGAAAGGAAGTTTTGGCTATCTCGATCCGGAGTACTTCAGAAGACAACAGTTAACCGAGAAATCAGATGTTTACTCTTTCGGAGTTGTTCTTTTTGAAGCTGTTTGTGCTAGAGCTGTGATAAACCCTACCTTGCCTAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGATGGCAAATAGAAAGATCACTTGAAAAAATCATTGACCCACGTCTTAATGGAAACTATTGTCCGGAATCGTTGTCTAAGTTTGGGGAAATAGCTGAAAAATGTCTCGCCGATGATGGTAAGAGCCGCCCGACCATGGGAGAGGTGTTATGGCACTTGGAGTATGTCTTGCAGCTGCATGAAGCTTGGCTCAATAGGGACAACAATAGCACAGAAAATTCCTTCTCTGGTAGTCAAGCTTTGAGTGGTCTAAATGATGGAAGAGTTGAGGTTGCGCAGGAGCATTCAAATCAAAATGAAGAGGTTGATTTGGATTTTAAAAATACAGCTGATTTAGTCCACAGCAGTGTGTAA 2568 0.4128 MMGKVIEEGLLFVLILMIVSKNVEAQQKSILINCGSNSSVNVDGRKWIGDMAPNNNVTLSSSPGVVASTDGLSGNSIYEPLYKTARIFTASLNYTIKDVHGNYFVRFHLCPFEIVDHNVNESSFGVVVNGMKLLSEFNVPGKISEKNVNLQNSGKNSSSFCLIKEYILDVNDGMLLIEFLPSGNSFGFINAIEIVPVVGELFDGSVGKVGGGNLNLTGHGMETMYRLNVGGPEIQSNQDPDLRRIWEVDSSYMVTENAGAAIKSSSNITYASANDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYVVRLHFCELMYDKSNERIFRIYINNRTAADNVDVFVRAGGKNKAYHQDHYDSASLRMDTFWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYVEKFDLAGKSGSSSKAKVLWIGVGAGIASVAIVACVGVFVFCFCKRRRKESSDTKTNSPGWRPIFLYGGAAVNSTVGAKGSTGNQKLYGTVTSTGAGKRFTLAEINAATNNFDDSLVIGVGGFGKVYKGEVDDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKSEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWAMRWQIERSLEKIIDPRLNGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNRDNNSTENSFSGSQALSGLNDGRVEVAQEHSNQNEEVDLDFKNTADLVHSSV 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01206 855 Pfam Protein tyrosine and serine/threonine kinase 526 788 IPR001245 GO:0004672|GO:0006468
Mepo6g01206 855 Gene3D Phosphorylase Kinase; domain 1 483 596 - -
Mepo6g01206 855 Gene3D Transferase(Phosphotransferase) domain 1 597 818 - -
Mepo6g01206 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Mepo6g01206 855 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Mepo6g01206 855 FunFam Receptor-like protein kinase FERONIA 597 811 - -
Mepo6g01206 855 CDD STKc_IRAK 527 792 - -
Mepo6g01206 855 FunFam Receptor-like protein kinase FERONIA 220 403 - -
Mepo6g01206 855 FunFam receptor-like protein kinase FERONIA 486 596 - -
Mepo6g01206 855 Gene3D - 25 197 - -
Mepo6g01206 855 Gene3D - 220 423 - -
Mepo6g01206 855 Pfam Malectin-like domain 32 400 IPR024788 -
Mepo6g01206 855 PANTHER OS07G0166700 PROTEIN 507 798 IPR045272 GO:0004714|GO:0006468
Mepo6g01206 855 SMART serkin_6 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01206 855 SUPERFAMILY Protein kinase-like (PK-like) 497 793 IPR011009 -
Mepo6g01206 855 ProSiteProfiles Protein kinase domain profile. 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01206 Mepo-Chr6 13087424 13090858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01206 4 819 Receptor kinase-like Gene Family AT1G30570 65.079 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo6g01206 Malectin_like 2.6e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01206 - - gmx:100791403 1353.96