Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01204 ATGGAAAAAACCATTAGCCATCCTTTTCAAACATATGGTGAAGAAGAATCCAAGCATCTCTTTCACCAACCACATGGTGTCTGTGTTGGCAAGGCTGCACCTCATGTAGAACTAAAGATATGCAAAGATGGTGACACTGGGAGAATTTTAACTAGAGGGCCACATTTAATGCTCAGGTATTGGGATCAAACCCTCACAAACACATCAAATCAGAGGAATGAAGTCTGGTTTGATACAGGTGACATTGGATCAATGGATTGTTGTGGTAACTTGTGGCTCCTTGGACGTACAAATGATCGCATCAAGAGTGGCGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACTAGAACATCCGGGGATTGCAAGAGTTGTTATTGTGGGAATACCAGATACACGTTTCACAGAGATGGTAACAGCATGTATCCAACCAAGAGAAAATTGGCAATGGTTAGAGCATTCTACTTCAAATGAAGAGTGTCACTTATCTAGAAAGAATCTTCAACAATACTGTCTGGAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTCATTGAATGGAGAAAGCCTTTTCCACTCACTACCACAGGAAAAATAAGAAGAGACCAAGTCCGAAAGGAGGTTCTGTCTGAGCTACAATCTTTGCATAGTAATCTCTGA 669 0.4036 MEKTISHPFQTYGEEESKHLFHQPHGVCVGKAAPHVELKICKDGDTGRILTRGPHLMLRYWDQTLTNTSNQRNEVWFDTGDIGSMDCCGNLWLLGRTNDRIKSGGENIYPEEVEAILLEHPGIARVVIVGIPDTRFTEMVTACIQPRENWQWLEHSTSNEECHLSRKNLQQYCLENNLSRFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSELQSLHSNL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01204 222 Pfam AMP-binding enzyme 28 103 IPR000873 -
Mepo6g01204 222 SUPERFAMILY Acetyl-CoA synthetase-like 23 216 - -
Mepo6g01204 222 CDD AFD_class_I 22 203 - -
Mepo6g01204 222 Gene3D - 5 101 IPR042099 -
Mepo6g01204 222 Pfam AMP-binding enzyme C-terminal domain 112 201 IPR025110 -
Mepo6g01204 222 Gene3D - 102 214 IPR045851 -
Mepo6g01204 222 PANTHER ACYL-COA SYNTHETASE 27 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01204 Mepo-Chr6 13064523 13065790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01204 30 215 Monolignol Biosynthesis Gene Families AT1G20480 29.231 5.52e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01204 K14760 - gmx:100787691 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01204 6 13064523 13065790 Mepo6g01204 6 13064523 13065790 ECH