Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01203 ATGGCTCATATTTGTCAATGTCTGAGTCGATTGTTAACTTTCCGGCGAGATTTTCCGGTGACCATTGCTGGAAACAACCGCAAGACAGGGCAAGAGTTGGTGGAGGAAGTGGTGTCACTAGCACATGGTCTTCTCCACCTGGGAGTCACACCAGGTGATGTTGTAGCCATCTCTGCTTACAACAGTGATTTGTATCTAGAATGGTTATTAGCTATTGCATTTGTTGGAGGAATTGCTGCTCCTCTGAATTATCGTTGGAGTTTTGAAGAGGCAAAGTTAGCAATGAAAGCAGTGAGGCCAGTGATGTTAGTGATTGATGAGAGCTGCTATTCATGGTACTTCAAATTCCAACAAAATGATGTTCCATTTTTGAGATGGCATGTTTTGTTGGATTCCCCTTCTTCAGATTTTACAAACAAATGGAATGTGTTGACTCCAGGAATACTTAAGAGGCATCATGTAAAGCCTCTAGAATTTAACTACTCATGGGCACCTGAAGGAGCTGTCATAATCTGCTTCACTTCAGGAACTACTGGAAAACCCAAGGGAGTCACAATAAGCCATGAAGCTTTGATCATACAGTCCCTAGCCAAGATTGCCATAGTTGGATATAGTGAGGATGATGTTTATCTTCATACTGCTCCATTATGTCATATTGGTGGTTTGTCATCTGCCATGGCCATGCTTATGGTTGGAGGTTGTCATGTATTCATGCCGAAGTTTGATGCAAAATTAGCTGTTGGGGACATAGAGCAATATAATGTGACATCTCTTATAACAGTTCCTGCAATAATGACCAGTCTTATTTCTATTGTTAGGCGCAAAGAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTCAATGGAGGTGGAAGCCTCTCGCTTGAGCTTATCAAAGACACTAGCATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAAGCATGTTCTTCATTGACATTCCTAACGCTGTATGATCCGATGCAAAAAACCATTAGCCATCCTTTTCAAACATATGGTGAAGAAGAATCCAAACATATCATTCATCAACCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAATTGAAGATATGCAAAGACGGTGACGCAGGAAGAATTTTAACTAGAGGGCCACATTTAATGCTCAGGTATTGGGATCAAACCCTCACAAACACATCAAATCAGAGGAATGAAATCTGGTTTGATACAGGTGACATTGGATCAATGGATTGTCGTGGTAACTTGTGGCTCCTTGGACGTACAAATGGTCGCATCAAAAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACTAGAACATCCAGGGATTGCAAGTGTTGTTATTGTGGGAATACCAGATGCACGTTTCACAGAAATGGTAGCAGCATGTATCCAACCAAGAGAAAATTGGCAATGGTTAGAGCATTCTACTTCAAATGAAGAGTGTAATTTATCCATAAAGAATCTTCAACAATACTGTCTGAAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTCATTGAATGGAGAAAGCCTTTTCCACTCACTACTACAGGAAAAATAAGAAGAGAGCAAGTCCGAAAGGAGGTTCTGTCTGAGCTGCAATCTTTGCATAGTAATCTCTGA 1665 0.4072 MAHICQCLSRLLTFRRDFPVTIAGNNRKTGQELVEEVVSLAHGLLHLGVTPGDVVAISAYNSDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVRPVMLVIDESCYSWYFKFQQNDVPFLRWHVLLDSPSSDFTNKWNVLTPGILKRHHVKPLEFNYSWAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAKLAVGDIEQYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTEACSSLTFLTLYDPMQKTISHPFQTYGEEESKHIIHQPQGVCVGKAAPHVELKICKDGDAGRILTRGPHLMLRYWDQTLTNTSNQRNEIWFDTGDIGSMDCRGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASVVIVGIPDARFTEMVAACIQPRENWQWLEHSTSNEECNLSIKNLQQYCLKNNLSRFKIPKIFIEWRKPFPLTTTGKIRREQVRKEVLSELQSLHSNL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01203 554 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Mepo6g01203 554 CDD AFD_class_I 171 535 - -
Mepo6g01203 554 SUPERFAMILY Acetyl-CoA synthetase-like 4 548 - -
Mepo6g01203 554 PANTHER ACYL-COA SYNTHETASE 4 545 - -
Mepo6g01203 554 Gene3D - 5 429 IPR042099 -
Mepo6g01203 554 Pfam AMP-binding enzyme C-terminal domain 444 533 IPR025110 -
Mepo6g01203 554 Gene3D - 431 546 IPR045851 -
Mepo6g01203 554 Pfam AMP-binding enzyme 17 435 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01203 Mepo-Chr6 13056215 13061216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01203 40 462 Monolignol Biosynthesis Gene Families AT3G21240 29.977 1.55e-38 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01203 K14760 - gmx:100809925 887.1