Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01177 ATGGAGGATTCCGAAGGAGTCCTCAACTTCGATTTCGAGGGCGGTCTCGACGCACAACCTTCCGCCGCCACCGCAATCATCTCCACCGCCGCCGTTTCCACTCCGATCGTCCAATCCGATTCCTATTTACCACCTTCCAATGGAGCCGCAACCGCGGCTCCATCTGTTGCTGAACATGTTCCCGGTAATGCTCCCGGTCGACGAAGCTTCCGGCAAACGGTTTGTCGTCACTGGCTAAGGAGTTTGTGTATGAAAGGCGAAGCGTGTGGGTTTTTGCATCAGTATGATAAAGCGAGAATGCCGATTTGTCGGTTTTTTAGATTGTATGGAGAATGTCGTGAGCAGGATTGTGTTTATAAGCATACTAATGATGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCTAATGGGCCTGATTGTCGATATAGGCATGCAAAATCTCCTGGACCTCCTCCTCCAATTGAAGAGGTTCTTCAAAAGATCCAACATTTATATTCTTACAATTACAACAACTCTCACAAGTTTAGCCAACAACGGGGTTCTAACTATAATCAACAAGTTGAAAAGTCTCAGTTTCCTCAAGGAATTAATTCTGCAAACCAAGGTGCGATTGGAAAACCATCAGTTGCAGAGTCAGGAAATGGCCAGCAGCAGCAACAAGTTCAACAGTCTCAGCAGCAAGTCAGCCAGAACCAAGCGCAAAATCTTGCTAATGGCCAGCCCAATCAAGCCAATCGAACATCAACCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAGAGTTGCAATCGTGAAAACTTGGAGTTGTCTGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCAAAACTAAATGAAGCATTTGACTCTGTGGAAAACGTGATATTGGTTTTCTCAGTCAACCGTACTCGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCTGGTGGAAACTGGAAATATGCTCATGGAACGGCACATTATGGACGTAATTTCTCTGTTAAGTGGTTGAAGTTATGTGAACTATCATTCCACAAAACTCGCCATTTGAGAAATCCATACAATGAGAACTTACCGGTGAAGATAAGTAGAGATTGTCAGGAGCTGGAACCCTCTATCGGTGAGCAGTTGGCATCCTTACTATATACTGAGCCAGATAGTGAACTTATGGCTATCTCAATTGCAGCAGAGTCTAAACGAGAAGAAGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTCCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAGGAGAGCTTTGGTCAAGCTGTAGGGCCAGCTGTTCAAGGAAGAGGTAGGGGCAGAGGAGGTATGATGTGGCCCCCTCACATGCATCTTGGGCGTGGAGCAAGACCGATCCATGGAATGCAAAATTTTAATCCTATGATGGGCGATGGATTATCCTACGGACCTGGTGGACCCGATGGTTTTGGTATGCCAGATCTTTTTGGCATGGGTCCCCGAGGTTTTGGTCCATATGCTCCTAGGTTCGGTGGTGATTTTGGGGGTCCCCCAGCTGGCATGATGTTCCGAGGTCGACCCTCAAACCCTGGGATGTTTCCCGGTGGTGGATTTGGGATGATGATGAATCCTGGACGTGGTCCTTTTATGGGGGGAATGGGGGTTCCAGGTCCAAACGCACCAAGAGGTGGTAGGCCAGTCAATATGCCTCCGATGTTTCCACCACCTCCACCTCCACCACAAAATATAAACCGCACTGGCAAAAGAGATCAAAGACCAAGTGATCGGAATGATAGGTATGGTTCAGGACCAGAGCAGGGTAAGAGTCAAGACATGCTCAGTCAAAGTGGGGGTCCTGATGATGACATGCAGTATCAGCAAGGATACAACAAGTCACAGCAGGATGATCGGAATGACGATAGTGAAAGTGAAGATGAGGCACCTAGGCGGTCAAGACACGGAGAGGGAAAAAAAAGAAAAGGCGAATCTTAG 2052 0.4635 MEDSEGVLNFDFEGGLDAQPSAATAIISTAAVSTPIVQSDSYLPPSNGAATAAPSVAEHVPGNAPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNDDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNYNNSHKFSQQRGSNYNQQVEKSQFPQGINSANQGAIGKPSVAESGNGQQQQQVQQSQQQVSQNQAQNLANGQPNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYTEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGQAVGPAVQGRGRGRGGMMWPPHMHLGRGARPIHGMQNFNPMMGDGLSYGPGGPDGFGMPDLFGMGPRGFGPYAPRFGGDFGGPPAGMMFRGRPSNPGMFPGGGFGMMMNPGRGPFMGGMGVPGPNAPRGGRPVNMPPMFPPPPPPPQNINRTGKRDQRPSDRNDRYGSGPEQGKSQDMLSQSGGPDDDMQYQQGYNKSQQDDRNDDSESEDEAPRRSRHGEGKKRKGES 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01177 683 ProSiteProfiles Zinc finger C3H1-type profile. 69 96 IPR000571 GO:0046872
Mepo6g01177 683 MobiDBLite consensus disorder prediction 608 622 - -
Mepo6g01177 683 Pfam YT521-B-like domain 259 321 IPR007275 GO:0003723
Mepo6g01177 683 Pfam YT521-B-like domain 338 393 IPR007275 GO:0003723
Mepo6g01177 683 SUPERFAMILY CCCH zinc finger 71 94 IPR036855 GO:0046872
Mepo6g01177 683 Gene3D - 63 126 - -
Mepo6g01177 683 FunFam Cleavage and polyadenylation specificity factor 30 kDa subunit 64 125 - -
Mepo6g01177 683 Gene3D ph1033 like domains 237 399 - -
Mepo6g01177 683 MobiDBLite consensus disorder prediction 198 254 - -
Mepo6g01177 683 MobiDBLite consensus disorder prediction 653 683 - -
Mepo6g01177 683 MobiDBLite consensus disorder prediction 623 652 - -
Mepo6g01177 683 MobiDBLite consensus disorder prediction 572 683 - -
Mepo6g01177 683 MobiDBLite consensus disorder prediction 433 452 - -
Mepo6g01177 683 ProSiteProfiles Zinc finger C3H1-type profile. 123 150 IPR000571 GO:0046872
Mepo6g01177 683 MobiDBLite consensus disorder prediction 411 472 - -
Mepo6g01177 683 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 41 675 IPR045168 -
Mepo6g01177 683 ProSiteProfiles YTH domain profile. 259 394 IPR007275 GO:0003723
Mepo6g01177 683 SMART c3hfinal6 125 149 IPR000571 GO:0046872
Mepo6g01177 683 SMART c3hfinal6 97 123 IPR000571 GO:0046872
Mepo6g01177 683 SMART c3hfinal6 69 95 IPR000571 GO:0046872
Mepo6g01177 683 CDD YTH 260 394 IPR007275 GO:0003723
Mepo6g01177 683 MobiDBLite consensus disorder prediction 583 603 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo6g01177 YTH 1.3e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01177 K14404 - gmx:100802826 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01177 6 12721805 12731604 Mepo6g01177 6 12721805 12731604 ECH