Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01162 ATGGTGAGAGATTTCATGGGTTTGAACTCAAAAGAAAAAGAACCACTGATCCATGGTACTGCCAAGGAGGAGGAAATCAACCATGATGATGATGATGGATCATGCAAACACTCTGGCTTCACAAAGGGCTTGGGTGCACAATGGCCCTTCTCCAACAAAGCATCTGCTCAACCACATTTGATGTCTTTTGAGGTTTCTCAAGATGATACTACAAAGATCTTATCTGAGCCCATAACACCTGCTGGTTTTATAACTCCAGACACATCTGACTCTAGTAAAAAACTCTCTGCTGCTGAACCTCAGAAATCTTTCAAACATGACGAGCAAGGTGGCTTTCATTTTTCACTTACTCCATGTCCTGTACAACATGATGTGAAGATGTTTTCACTTTCCAATCAAGCGAATTCTGTTTCATTGACGAACTCATTCTCGAGGAATCATTTTGTAACTGCTGGTCAGAATATGAATGGTAATCATATGAAGCTGCCACTGCTTGGGGGAATACCTGTTACAGCACCTCAATCAACTGTTCCCACCATTGGTGCTGTTGTTGGAATGGCTGAATCATACAATGTGAAACCATCTCTGCCTTCTTCCCAACTTACCATCTTCTATGCGGGCACTGTCAATGTCTTCGATGACATCCCTGCTGACAAGGTACAAGCTATCCTGTTGTTGGCTAGGAATGGCGTATCAGTGGCTTCTAACATAGCAAAAGCAAAAGTTCAGGCATCTGATGATGGTGTGCCTGTGAGTCAACCTGCAAATGCACCACCCTCCTCTGGTCATCCAAGTCCTATATCTAATTCATCGTATACTGGTGCACAGTCAGGCAGTGGCTCAACTAGCAGTGATGAATTTCTCGCAGTTAAAACAACTGGTGTTCCCACCACTCCTGTTAGCAATGCCGAGCCTCCAAAAGTAATCAATGCCATTACCATGCTGGCGTCTGGTATGTTGGAAGTACTAGTTCTCATCGTTGCAGTCAGATTATCTTGTTTATTGAAATCTTGTTTGGGGATATTTGTCTACATTTTACACATTGAAGAGAAACAAATCCATTTTATACATTTAATAATTTCACTACCAATCTTTTATACAGCGATACCTCAGGCTCGGAAAGCATCCTTTGCTCGTTTTTTAGAAAAGCACAAGGAGAGGGTGATGAATGCAGCACCATATAACGTTAACAAGAAATCTGAAGAGTGTTCTGCTTCATAA 1221 0.4201 MVRDFMGLNSKEKEPLIHGTAKEEEINHDDDDGSCKHSGFTKGLGAQWPFSNKASAQPHLMSFEVSQDDTTKILSEPITPAGFITPDTSDSSKKLSAAEPQKSFKHDEQGGFHFSLTPCPVQHDVKMFSLSNQANSVSLTNSFSRNHFVTAGQNMNGNHMKLPLLGGIPVTAPQSTVPTIGAVVGMAESYNVKPSLPSSQLTIFYAGTVNVFDDIPADKVQAILLLARNGVSVASNIAKAKVQASDDGVPVSQPANAPPSSGHPSPISNSSYTGAQSGSGSTSSDEFLAVKTTGVPTTPVSNAEPPKVINAITMLASGMLEVLVLIVAVRLSCLLKSCLGIFVYILHIEEKQIHFIHLIISLPIFYTAIPQARKASFARFLEKHKERVMNAAPYNVNKKSEECSAS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01162 406 MobiDBLite consensus disorder prediction 245 284 - -
Mepo6g01162 406 Pfam Jas motif 370 394 IPR018467 -
Mepo6g01162 406 ProSiteProfiles Tify domain profile. 194 229 IPR010399 -
Mepo6g01162 406 MobiDBLite consensus disorder prediction 78 100 - -
Mepo6g01162 406 MobiDBLite consensus disorder prediction 254 284 - -
Mepo6g01162 406 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 109 405 IPR040390 -
Mepo6g01162 406 MobiDBLite consensus disorder prediction 1 34 - -
Mepo6g01162 406 MobiDBLite consensus disorder prediction 82 98 - -
Mepo6g01162 406 Pfam tify domain 198 227 IPR010399 -
Mepo6g01162 406 SMART tify_2 194 229 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01162 Mepo-Chr6 12485901 12489396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01162 368 406 Tify Gene Family AT3G17860 60.000 4.65e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo6g01162 tify 3.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01162 K13464 - gmx:100807043 357.066