Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01155 ATGCCAACATTACAAGAGCTCCATCTTGAAAAAAATTTGATCAATGGTGGCATCAATTTATCGTCTTCTCTTGACCAATCTCATCTTCAAGTTCTCGATCCTTCTCACAACCAACTTAGTAGCTTTTTTCCTGATGAGTTTGGATCATTAACTACCCTGAGAATGCTCAACATTGCTGGAAATAACTTTGTTTGTTCTCTTCCAACCACTATTGCAGACATGAGTTCTTTTGACTCCCTTGATATATCAAATAATCGTTTTACCGGTCCACATCCAAATGACATGCCAAAGGGACTCAAAGACTTCAATGCTTCTGAAAATGATCTATCTAGAGTTGTCCCAAAAGTTCTTAGGATGTTCCCTAGTTCATCTTTCTTTCTTGGGAATGCTAAGTTACATTTTCCAAATACTCCACCTGGATCAACCGTTTCACCTACCGAAAGTTCCAAGGGGAAGTCTGTGTCCACAGTTGTTAAAATCGACCAGGGAAGAAACGGTCCACCGTCAACATGGGCTCAAAGGATCAAAATAGCAGTCGATGTAGCAAGTGGCCTGAACTATCTCCATTTCGACCGAGCTGTTCCTCATGGAAACCTTAAAGCTACAAATGTGTTGTTAGATACCGCTGATATCAGTGGCGCTGGTACTATTGAACAAATTCTTGATGCTGGTGTCTTATGTTGTTGCGTTCCGGAGTTAACTGCTTCCAAGAAGCCAATGCCTTCCTTCAAGTCAGATGTCTATGTTTTTGGCGTGATGCTTTTGGAACTTTTAACCGGAAGGTGTGCTTGTGATGTGATAACTGGTGAGGAGGGAGGTGTTGATCTTGCAGATTGGCTAAGACTGTGA 849 0.417 MPTLQELHLEKNLINGGINLSSSLDQSHLQVLDPSHNQLSSFFPDEFGSLTTLRMLNIAGNNFVCSLPTTIADMSSFDSLDISNNRFTGPHPNDMPKGLKDFNASENDLSRVVPKVLRMFPSSSFFLGNAKLHFPNTPPGSTVSPTESSKGKSVSTVVKIDQGRNGPPSTWAQRIKIAVDVASGLNYLHFDRAVPHGNLKATNVLLDTADISGAGTIEQILDAGVLCCCVPELTASKKPMPSFKSDVYVFGVMLLELLTGRCACDVITGEEGGVDLADWLRL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01155 282 SUPERFAMILY L domain-like 2 125 - -
Mepo6g01155 282 SUPERFAMILY Protein kinase-like (PK-like) 165 267 IPR011009 -
Mepo6g01155 282 Pfam Leucine rich repeat 2 63 IPR001611 GO:0005515
Mepo6g01155 282 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Mepo6g01155 282 Pfam Protein tyrosine and serine/threonine kinase 167 260 IPR001245 GO:0004672|GO:0006468
Mepo6g01155 282 ProSiteProfiles Protein kinase domain profile. 1 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01155 282 Gene3D Transferase(Phosphotransferase) domain 1 146 274 - -
Mepo6g01155 282 PANTHER OS07G0626500 PROTEIN 163 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01155 Mepo-Chr6 12406701 12409390 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01155 153 280 Receptor kinase-like Gene Family AT3G17840 38.406 7.70e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo6g01155 PK_Tyr_Ser-Thr 1.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01155 - - lja:Lj0g3v0361919.1 237.269