Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01136 ATGGAAGCCGCCGGCGACGGTTACGGCGGACGACGAACTCAACAACCGACCGACGAGGTGAGTCTACAACCAGAATGGCGACGCCGAACTGCTTCAACCGGAAGAGAGCAAAACCTTACACTCCAGCGAGAATGGAGACGAGGGAAACCAACCGCTTCTCCTTCTCCTTCCGGTGCCGGCTATGAAGGTGAAAAGAAGGTAGAGGAGCAGAAAAAGGAACTAGAATGGAGAAGCTCAAAGGTGAATGCAAGTAGTGTTTGGGAACCGGAATGGAGACGATCAAGGTCTGGTACTAGTGCTACTACCACTGCATATCCATGGAATCGAAATGTTGATGAATCGCAGCGAAATGCTCCATCATCAGCAGATTATTCAGTTCCAAAACTGGAAAGACTGCAGATATCAGACAATTTAGCTTCATCATCTTCGGCACTTGAAAAAGAGGATAAAACTTCACCTATTCGGAGACCTGACAGTGGTGGCACATTAGCGGTTCTTACAAGCACACTCCGTGTCAATCATTTCCCTGTTAAGTTCGATCCACGGAATATAATATTTCATTATAATGTTGCTGTCAAACCAAAGTTTTCCTCAAAAGTTGGCCAGCGTCGGAAGTTATCTAATAACGATCTTTCCATGATTAAAGAGAAATTGTTTTCTGATGATCCTGGGAGGTTTCCCTTGGACATGACTGCACATGACGGTGCAAAAAATATCTTTAGTGCAGTGCAGTTGCCAGAAGAGACCATTACTGTGGAGATCTCTGAAGGAGAGGATGAAAAGTTCACTTCATATAGTGTTACCATAACACTTCTTAATAAACTCAGATTTCACAAGTTAATGGACTATCTCTGTGGGCAATCATTCTCTCTGCCTAGGGATGTTTTGCAAGGGATGGATGTGGTAATAAAAGAGAATCCTGCTAGGTGCACAATTGCTGTGGGACGATTCTTCTATCCCACAAATCCTCCTTTGGTAATGAAGGAACTTCGCCCTGGAATAATCGCAGTCGGGGGGTTTCATCATAGTTTAAAACCTACATCTCAGGGCCTGTCCTTATGTGTAGACTACTCGGTGGTGCCTTTCCGAAAGCAAATGTCAGTCTTGGATTTCTTGTATGAGCGTGTTGATAACTTTAACTTGGATGAATTTGAAAAATTCAGGAAATACGTTGAGGAAGTGCTTATTGGATTGAAAGTTAGTGTGACACACCGTAAATCCCAACAAAAATATATCATTGCAGGATTAACACCTACGGTTACAAGGTATGTCACTTTCCCCATTGACCATACTAAGGGCTGGAAACTTGAAAAGGAAGTCAGTCTTCTTAGCTTTTTTAGTGACAAATATGACAAGGACATTGTATACAAAGATATTCCTTGTTTAGATTTAGGGAAAGGCAACAAGAAGAACTATGTACCCATGGAATTTTGTGTTTTAGCTGAAGGCCAAAGGTATCCTAAGGAGCGTTTAGATGGTATTTCTGCAAAGACATTGACGGCAATGGCTCTAGCTCACCCAAGTGAGCGGCAGGGTGCTATACAGAAGATGGTGCAATCTAGTGATGGACCTTGCGGGGGTGATCTTATTCAGAACTTTGGAATGAGAGTCAGCACGACCATGACAACTATTCAAGGACGTGTAATTGGCCCTCCGGAATTGAAGTTGGGTGATCCAAATGGAAAGAATGTCAAGATAACAGTGGATCTAGATAAATGTCATTGGAACCTTGCTGGAAGATCAATGGTGGAAGGCAAACCAGTTGAGCGTTGGGGCATTCTTGATTTCACCAGTATTGGACCGTATAATAAAAAATTTAGACGAAAGGAATTCGTTGAAAAGTTTATTGGTAAATACAAAAAGTTGGGTATCAATATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTACGAGTCATGACTTGCTATCTGAATTACTTGAAAAAATCAACAACATTTGTAAATATAACCAAGGTCGCTTACAATTTCTTCTCTGTGTGATGGCTAATAAAAATCCAGGTTACAAATACCTCAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACACAATGTTGTTTGTCTTATAGTGCTAATCAAGGGGATGACAAATTCTATACTTATCTGGCTCTCAAAATCAATGCCAAGCTCGGAGGCAGTAATGTAGAGCTCAATAACAGGCTCCCTTACTTTGAAGGTGAAGAACATGTTATGTTTATAGGGGCTGATGTCAATCACCCTGGTTCGCACGACAACAAGAGTCCGTCAATTGTTGCTGTGGTTGCAACCGTTAACTGGCCTGCTGCAAATCGTTATGCAGCACGTGTTTGCCCACAATTCAATCGTAGTGAGAAAATATTGAACTTTGGGGAGATTTGCGTTGAGCTTGTTAGTTGCTATTGGCGAACGAATGGAGTCAGGCCTGAAAAAATTGTTGTTTTTCGTGATGGGGTGAGCGAGTTCCAGTTTGACATGGCTCTTAATGAAGAGCTACTTGATTTGAAGAGAGCATTCCAAAGATTAAATTATTTCCCAACGATCACTCTTATTGTTGCACAAAAACGACATCAAACTCGATTTTTTCCAGACGGTTGGAAGGGTGGGTCTTCCAGCGGCAATATTTTACCGGGAACGATCGTTGACACAAAAGTTACTCACCCCTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCCTTGGTACAAGCAAGCCCACTCACTATCATGTTTTATGGGATGAACACAAGTTTACATCTGATGAATTGCAGAAACTTATTTATGAGATGTGCTTCACCTTTGCAAGGTGCACTAAACCTGTGTCTCTAGTCCCTCCTGTGTATTATGCTGACCTTGCTGCTTATAGAGGACGGTTATACCACGAAGCAAAGACTGGGATGCAACCTAAGAAGTCAAGAGCATATTTGTCTTCTAAAGATTCATCATCAATTCCACCGACAGCTTCGTTTGAACAGGGATTTTACAGGCTGCATGCTGACCTGGAAAACATTATGTTCTTCGTCTAA 3036 0.4193 MEAAGDGYGGRRTQQPTDEVSLQPEWRRRTASTGREQNLTLQREWRRGKPTASPSPSGAGYEGEKKVEEQKKELEWRSSKVNASSVWEPEWRRSRSGTSATTTAYPWNRNVDESQRNAPSSADYSVPKLERLQISDNLASSSSALEKEDKTSPIRRPDSGGTLAVLTSTLRVNHFPVKFDPRNIIFHYNVAVKPKFSSKVGQRRKLSNNDLSMIKEKLFSDDPGRFPLDMTAHDGAKNIFSAVQLPEETITVEISEGEDEKFTSYSVTITLLNKLRFHKLMDYLCGQSFSLPRDVLQGMDVVIKENPARCTIAVGRFFYPTNPPLVMKELRPGIIAVGGFHHSLKPTSQGLSLCVDYSVVPFRKQMSVLDFLYERVDNFNLDEFEKFRKYVEEVLIGLKVSVTHRKSQQKYIIAGLTPTVTRYVTFPIDHTKGWKLEKEVSLLSFFSDKYDKDIVYKDIPCLDLGKGNKKNYVPMEFCVLAEGQRYPKERLDGISAKTLTAMALAHPSERQGAIQKMVQSSDGPCGGDLIQNFGMRVSTTMTTIQGRVIGPPELKLGDPNGKNVKITVDLDKCHWNLAGRSMVEGKPVERWGILDFTSIGPYNKKFRRKEFVEKFIGKYKKLGINMQEPIWYEESSMKILTSHDLLSELLEKINNICKYNQGRLQFLLCVMANKNPGYKYLKWISETKVGIVTQCCLSYSANQGDDKFYTYLALKINAKLGGSNVELNNRLPYFEGEEHVMFIGADVNHPGSHDNKSPSIVAVVATVNWPAANRYAARVCPQFNRSEKILNFGEICVELVSCYWRTNGVRPEKIVVFRDGVSEFQFDMALNEELLDLKRAFQRLNYFPTITLIVAQKRHQTRFFPDGWKGGSSSGNILPGTIVDTKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEAKTGMQPKKSRAYLSSKDSSSIPPTASFEQGFYRLHADLENIMFFV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01136 1011 Gene3D paz domain 361 486 - -
Mepo6g01136 1011 SMART DUF1785_2 312 365 IPR014811 -
Mepo6g01136 1011 Pfam PAZ domain 382 496 IPR003100 GO:0005515
Mepo6g01136 1011 SMART Piwi_a_2 666 964 IPR003165 GO:0003676
Mepo6g01136 1011 Pfam N-terminal domain of argonaute 169 303 IPR032474 -
Mepo6g01136 1011 MobiDBLite consensus disorder prediction 62 78 - -
Mepo6g01136 1011 Pfam Argonaute linker 2 domain 509 555 IPR032472 -
Mepo6g01136 1011 CDD Piwi_ago-like 530 963 IPR045246 -
Mepo6g01136 1011 SUPERFAMILY Ribonuclease H-like 658 965 IPR012337 -
Mepo6g01136 1011 Pfam Argonaute linker 1 domain 313 364 IPR014811 -
Mepo6g01136 1011 ProSiteProfiles Piwi domain profile. 666 965 IPR003165 GO:0003676
Mepo6g01136 1011 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 169 966 - -
Mepo6g01136 1011 SUPERFAMILY PAZ domain 361 520 IPR036085 GO:0005515
Mepo6g01136 1011 Gene3D - 548 729 - -
Mepo6g01136 1011 MobiDBLite consensus disorder prediction 1 161 - -
Mepo6g01136 1011 Pfam Piwi domain 667 961 IPR003165 GO:0003676
Mepo6g01136 1011 Gene3D - 736 1011 IPR036397 GO:0003676
Mepo6g01136 1011 CDD PAZ_argonaute_like 366 481 - -
Mepo6g01136 1011 ProSiteProfiles PAZ domain profile. 366 482 IPR003100 GO:0005515
Mepo6g01136 1011 MobiDBLite consensus disorder prediction 79 122 - -
Mepo6g01136 1011 SMART PAZ_2_a_3 366 499 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01136 Mepo-Chr6 12220385 12225052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01136 170 968 Eukaryotic Initiation Factors Gene Family AT1G48410 34.752 1.03e-142 452