Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01105 ATGGGCTCGGAGAATGAAATTTCTCCGGCCGACGTTCATAAGGCTCCTCCCGGCAAAGAACAACAAGCTGCCGGAGTCGGAATCCTTCTTCAGATCATGATGTTAGTTTTATCCTTCGTTCTCGGTCACGTTCTCCGTCGCAAAAAGATTTACATCATTCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTATTTTAGCTAACATTTCAGATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCATGAGGAGTTTTTTTTCTTGTTCCTGTTACCTCCGATCATATTTCAGTCTGGTTTCAGTCTTGCACCTAAACCCTTTTTCTCAAATTTCGGTGCAATTGTCACATTTGCTATATTTGGTACCTTTCTAGCTTCATTTGTAACAGGTGCCTTGGTTTATCTTGGTGGGTTGGCCTTCCTCATGTATAGACTACCTTTTGTTGAGTGCATGATGTTTGGTGCTCTGATATCAGCAACCGATCCCGTTACTGTTTTGTCCATATTCCAGGAGCTGGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAAAAATAATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTTTGTCTGCAGGCGTTGGAGTTGGGTTTACATCTGCTTTGCTATTTAAGTATGCAGGCTTGGATGTTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCCGGTATTGTATCAATATTATTCACAGGAATTGTCATGAAGCACTATGCATATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCGCATGTTGGATTTATATTCTTCTCTGTTATATTCATTGTGATTGCAAGAGCCGCGAATGTCTTCTCTTGTGCTTACCTGGTCAATCTGGTCAGACCTGCTCATCGAAAGATACCTCCAAAATACCAAAAGGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGATACTCACAGCGATAACTCTTTGGCTTCAGTTGGTCCCATTACAGATTACGGGGGGAACAATGGTTATATTGCTCCTTCATACGAGGAAGAATCATCGTCATCTGGGAACAAAATAAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACGGCATTAGATAGAAATTATCTCACCCCGTTCTTTACAAGCCATAACGGAGATGAGGATGAAGAAGCCGAGCCTTTTACTTCTGCGAGATCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCTTATGCATCGCCGTGA 1638 0.4151 MGSENEISPADVHKAPPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGILANISDTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASFVTGALVYLGGLAFLMYRLPFVECMMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKNNPSGQNFFMVVVRFLETFVGSLSAGVGVGFTSALLFKYAGLDVDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSVIFIVIARAANVFSCAYLVNLVRPAHRKIPPKYQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDTHSDNSLASVGPITDYGGNNGYIAPSYEEESSSSGNKIKMKLKEFHKSAASFTALDRNYLTPFFTSHNGDEDEEAEPFTSARSFTSSRSGFHGQSPYASP 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01105 545 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Mepo6g01105 545 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Mepo6g01105 545 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Mepo6g01105 545 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Mepo6g01105 545 Gene3D - 151 203 - -
Mepo6g01105 545 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Mepo6g01105 545 MobiDBLite consensus disorder prediction 524 545 - -
Mepo6g01105 545 MobiDBLite consensus disorder prediction 508 545 - -
Mepo6g01105 545 NCBIfam sodium/hydrogen exchanger 3 32 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Mepo6g01105 545 PANTHER SODIUM/HYDROGEN EXCHANGER 15 531 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01105 Mepo-Chr6 11816040 11823549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01105 21 454 Antiporters AT3G05030 33.113 3.25e-51 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01105 K14724 - gmx:100790830 889.797