Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01069 ATGGACTCGAAAACTAGTGCTAGATCTCTCTCAAAACAACATCAGAAAACATCCGGGATTCAAACACCTGAGGCGAAAGACCTCAAGTTTTCTTCGCTGTCGCTTCAAAAGACAGGGAAATCTGAGCCTGAAGATTTGTCCAAGTCTGTACAAAACACATCAAAGCAGAATGTCGGCGAGATTTATGAAAGTAAGAAGTTTGGTGTTCCGTCTCAAAAGGGTTCTTCTGCTGATTCATTGAGTAGTAAATTCGGTTCTGGTGCCTCCTCATCCGTTGTTAATGTGAACACAGGCTCACAAGAAAGCTCTATCGATCAAGACAAAAAGACTTCAGAATATGGAAGTGTGAAAAACAGTTCTGTTTCTGCGAAAGCTAGCGATGGTGCCAGCAGTATTGCGAAGACAAGTGGCAGTGCTAAGATCAGTGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGTGTAAACAAGCCTCACAAAGCAAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGAGATGGAGCATTGGGTTTAGGCCACTTCAGACTTCTGAAGAGATTGGGTTGTGGAGATATTGGAAGTGTTTACTTATCTGAGTTGAGTGGAACTAAATGTTACTTCGCAATGAAAGTGATGGACAAAGGGTCTTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAGATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAATTTTCATGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTTTATGTGGCAGAGGTCCTACTTGCAATGGAGTACCTACACATGCTTGGGATTGTATATCGTGATCTTAAGCCAGAAAATGTTCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGATGTGCTGTTAGTCCAACCCTAGTTAAATCCTCGTCCATTGATTCAGAGCCTTTAAGAAAGAATACTGGTTACTGTGCTCAGCCTGCATGTATTGAGCCGCCATCCTGCATTCAGCCATCCTGTGTTGCTCCTACTTCGTGTTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAAGAACGGAAGGCCAAAACCGAACTTGGCAATCAAGTCAGTCCTCTACCCGAGCTCATTGCAGAGCCCACCGACGCTCGCTCTATGTCATTTGTTGGAACTCATGAATACCTGGCACCTGAGATAATCAAGGGTGAAGGTCACGGCAGTGCAGTTGATTGGTGGACTTATGGGATCTTTCTATACGAGTTGTTGTTTGGCAAAACTCCGTTTAAGGGATCCGGGAACCGAGCCACGCTGTTTAACGTGGTAGGTCAGCCGCTGCGATTTCCAGAAGCACCTGTTGTTAGCTTTGCAGCAAGGGATCTTATCAGGGGTTTGCTTGTAAAGGAACCTCAGCACAGATTGGCTTATAAAAGAGGCGCAACCGAGATTAAACAACATCCCTTTTTTGAAGGCGTGAATTGGGCCTTGATCCGATGTGCTACACCACCCGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCCCCAGCTGCATCATCTGCCGGCGAAAAGGCCGTTGTTAACCACATGTCAACAGCTCCTAATCAGAAAGGTTCTGACAATTATCTGGAGTTTGATTTCTTTTAG 1815 0.4507 MDSKTSARSLSKQHQKTSGIQTPEAKDLKFSSLSLQKTGKSEPEDLSKSVQNTSKQNVGEIYESKKFGVPSQKGSSADSLSSKFGSGASSSVVNVNTGSQESSIDQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKAKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAASSAGEKAVVNHMSTAPNQKGSDNYLEFDFF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01069 604 FunFam Serine/threonine-protein kinase D6PK-like 204 289 - -
Mepo6g01069 604 MobiDBLite consensus disorder prediction 113 135 - -
Mepo6g01069 604 CDD STKc_phototropin_like 205 562 - -
Mepo6g01069 604 MobiDBLite consensus disorder prediction 10 60 - -
Mepo6g01069 604 Gene3D Phosphorylase Kinase; domain 1 204 289 - -
Mepo6g01069 604 Gene3D Transferase(Phosphotransferase) domain 1 290 357 - -
Mepo6g01069 604 FunFam Serine/threonine-protein kinase AGC1-7 437 562 - -
Mepo6g01069 604 ProSiteProfiles Protein kinase domain profile. 206 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01069 604 SUPERFAMILY Protein kinase-like (PK-like) 180 566 IPR011009 -
Mepo6g01069 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Mepo6g01069 604 PANTHER FLIPPASE KINASE 1-RELATED 26 568 - -
Mepo6g01069 604 MobiDBLite consensus disorder prediction 69 104 - -
Mepo6g01069 604 SMART serkin_6 206 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01069 604 Pfam Protein kinase domain 207 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01069 604 Pfam Protein kinase domain 441 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01069 604 Gene3D Transferase(Phosphotransferase) domain 1 438 562 - -
Mepo6g01069 604 MobiDBLite consensus disorder prediction 1 135 - -
Mepo6g01069 604 FunFam serine/threonine-protein kinase D6PK-like 290 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01069 Mepo-Chr6 11316891 11321422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01069 42 604 AGC Kinase Gene Family AT5G47750 78.191 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo6g01069 Pkinase 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01069 K08286 - gmx:100798088 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01069 6 11316891 11321422 Mepo6g01069 6 11316891 11321422 ECH