Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01049 ATGGACAGCATGAACCTCCTCGCCGCCGACCATGTTGCTCCATTTCCCGACTCCGGCGACCTTATCTTCGCCGCCGGCCTCCTCTCCAACCACCACAATCCCCAAAAACTCATCCCCATCAGGTCCATCCCTCCTCCTCCTCCTGGTTTCCCTTCTCACCACTCCCCTCTATCACCTTCCATCAAGGTTGAAGACCCGTCTGGATCCGGGTCGGGTCGTTCTTTGTTGCCCCTTTGTCAAGAACCCGGCTCGTCTTCGGATGACGTGGGCAATTCATCTGCTAGTACTAAAGAATTCGGCTCAAGAAAGAGAAGGAGAAAGAGTTCGAGAAAGCTGGAAGATTTTGCAGCAAATTTGGTAAAGAAGATGACGGAAAAGCAAGAGCAGATGCATAAAGAATTGGTGGAAATGATTGAGAGGATGGAAAAGGAAAGGATAAAGAGAGAAGAAGCATGGAAGCGCGAGGAGATGGAGAGAATTAAGCAGGACGAAGAAGCTAGAGCGGCTGAGAGGTCTCGTAGTTTAGCCCTCATATCGCTGATTCAGAAACTATTGGGTTATGAAATTCAGATTCCTCCACCAGCAGAAGGAAGCGGAATAAGAGAAGAGGATGAAGTTGAGGTGAACAACAACAACAACAGCCCACCCTTGACCAACAACGTGGGGTCGGCTGAGATGAACAACAACACCAACAGCCTAGCCTTAATCCAGTACGTGGGGCCGGCTGAGGTGAGCAATAAAAAAAGAGATTTCAACAGCGGCGATCCAAGTAACAATAGATGGCCAGATGTGGAAGTACAAGCGCTCATAGCAGTAAGAACCGCATTGGAACACAAGTTTGGTCATATGGGATCGAAAGGATCAATATGGGAGGAGATAGCTGGAGCTTTGCAGGGCATGGGATACAATCGTTCTGCGAAGAAGTGCAAGGAGAAATGGGAAAACATCAATAAGTACTATAGGAGGACAGTTGGGAGCGGCAAGAAACGGCCTGTTAATAGCAAAACTTGCCCTTACTTCGATGAATTGGATAATCTGTATAGAAATGGGTCCTTGGAGAGAAATGGAAATGCATTGAGCAATACCAACAATGTTTCCATAAGGGAAGAAAAGGAGCAGGGTGAAATTTGA 1131 0.4757 MDSMNLLAADHVAPFPDSGDLIFAAGLLSNHHNPQKLIPIRSIPPPPPGFPSHHSPLSPSIKVEDPSGSGSGRSLLPLCQEPGSSSDDVGNSSASTKEFGSRKRRRKSSRKLEDFAANLVKKMTEKQEQMHKELVEMIERMEKERIKREEAWKREEMERIKQDEEARAAERSRSLALISLIQKLLGYEIQIPPPAEGSGIREEDEVEVNNNNNSPPLTNNVGSAEMNNNTNSLALIQYVGPAEVSNKKRDFNSGDPSNNRWPDVEVQALIAVRTALEHKFGHMGSKGSIWEEIAGALQGMGYNRSAKKCKEKWENINKYYRRTVGSGKKRPVNSKTCPYFDELDNLYRNGSLERNGNALSNTNNVSIREEKEQGEI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01049 376 MobiDBLite consensus disorder prediction 39 54 - -
Mepo6g01049 376 MobiDBLite consensus disorder prediction 195 217 - -
Mepo6g01049 376 MobiDBLite consensus disorder prediction 351 367 - -
Mepo6g01049 376 PANTHER FI21293P1 71 365 - -
Mepo6g01049 376 MobiDBLite consensus disorder prediction 37 110 - -
Mepo6g01049 376 CDD GT1 259 323 - -
Mepo6g01049 376 MobiDBLite consensus disorder prediction 78 97 - -
Mepo6g01049 376 ProSiteProfiles Myb-like domain profile. 253 317 IPR001005 -
Mepo6g01049 376 MobiDBLite consensus disorder prediction 351 376 - -
Mepo6g01049 376 Gene3D - 261 322 - -
Mepo6g01049 376 FunFam Trihelix transcription factor GT-2 261 322 - -
Mepo6g01049 376 Coils Coil 120 151 - -
Mepo6g01049 376 Pfam Myb/SANT-like DNA-binding domain 259 346 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01049 Mepo-Chr6 11029509 11031763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01049 103 351 Trihelix Transcription Factor Family AT5G47660 42.169 1.13e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo6g01049 Myb_DNA-bind_4 3.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01049 - - tpra:123899422 382.489