Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01046 ATGGGAAATGTGAATGGAAGAGAAGAAGATTTCAACGGAACACTATCATCAGCTTCATCAACATCATCTGAAGTCAGTGATTCCATGTCTGCACCTGATGGGGTTGTTGAAAATCCTTCACCTGTTGAGTTAATGGGTCATTCTCCACCTGCTAGCCCTGGAACTACTCAATCTCCTTTAATGTTCACTCCTCAAGCTCCGGTGGTTCCACTACAAAGACCTGATGAGATGCAGGTTCCAAGCCCTTCCTTGATGCAAACTAATTCAGGTTATGAGGATATGTTCAGTGAAATTGGAATTCCGACGATGATTACTTGGAGTTATGATGGTAAAGAAGTTGCTGTGGAGGGATCATGGGATAATTGGAAAACGAGGATGCCATTGCAGAGATCAGGAAAGGACTTCACTATAATGAAGGTGCTGCCGTCTGGTGTTTATCAGTTTAGATTTATCGTGGATGGACAGTGGAGGTACGCACCTGACTTGCCTTGGGCTCGAGATGATGCTGCCAATACTTACAACATTCTCGACTTACAGGATTCCGTTCCTGAAGACCTTGGAAGTATTTCTAGCTTCGAACCTCCTAAATCACCAGACTCTAGCTACAACAACTTACACCTAAGCTCTGAAGATTATGCAAAGGAACCACCATTGGTTCCTCCATTCATGCAAGCGACTCTTCTTAATGTTCCTTCTGCAAATATGGAATTCCAACCTCTTGTATCCAGACCACAGCACGTAGTGCTCAATCATCTCTATATGCAGAAAGGAAAGAGTAGCCCTTCTGTGGTTGCACTTGGCTCGACACATCGATTTGTAGCCAAATATGTCACTGTGGTGATGTACAAGTCTTTGCAGAGGTAA 864 0.4387 MGNVNGREEDFNGTLSSASSTSSEVSDSMSAPDGVVENPSPVELMGHSPPASPGTTQSPLMFTPQAPVVPLQRPDEMQVPSPSLMQTNSGYEDMFSEIGIPTMITWSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWARDDAANTYNILDLQDSVPEDLGSISSFEPPKSPDSSYNNLHLSSEDYAKEPPLVPPFMQATLLNVPSANMEFQPLVSRPQHVVLNHLYMQKGKSSPSVVALGSTHRFVAKYVTVVMYKSLQR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01046 287 MobiDBLite consensus disorder prediction 9 29 - -
Mepo6g01046 287 SMART AMPKBI_2 195 285 IPR006828 GO:0005515
Mepo6g01046 287 Gene3D - 189 285 - -
Mepo6g01046 287 SUPERFAMILY E set domains 100 179 IPR014756 -
Mepo6g01046 287 Gene3D Immunoglobulins 95 182 IPR013783 -
Mepo6g01046 287 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 213 283 IPR006828 GO:0005515
Mepo6g01046 287 SUPERFAMILY AMPKBI-like 182 284 IPR037256 -
Mepo6g01046 287 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 287 IPR043554 -
Mepo6g01046 287 Pfam Glycogen recognition site of AMP-activated protein kinase 100 180 IPR032640 -
Mepo6g01046 287 CDD E_set_AMPKbeta_like_N 101 177 - -
Mepo6g01046 287 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01046 Mepo-Chr6 10986580 10990343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01046 99 180 Protein tyrosine phosphatase (PTP) family AT3G01510 32.955 9.37e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01046 K07199 - gmx:100777497 474.552