Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01018 ATGGACCCGGGGAAGCTATTCATTGGAGGGATTTCCTGGGATACAAATGAAGACCGACTCAGACAGTATTTTCAGAACTTTGGAGATGTAGTTGAAGCTGTGATAATGAAGGATCGGACCACGGGACGTGCTCGTGGTTTTGGATTTGTTGTTTTTGCTGATCCTTCTGTTGCCGAACGCGTTGTTATGGAAAAACATGTCATAGATGGTAGAACCGTTGAAGCAAAAAAAGCTGTCCCTAGAGATGATCAGAATGTGTTTAGCAGAAGCAACAGCAGCAGTCATGGATCGCCTGCTCCTACTCCTATACGCACAAAAAAGATATTTGTTGGAGGTTTAGCATCCACAGTTACTGAGAGTGACTTTAAGAATTACTTTGATCAATTCGGAACAATTACTGATGTTGTTGTAATGTATGATCATAACACTCAACGTCCTAGAGGTTTTGGATTCATCACATATGATTCTGAGGAAGCAGTTGAGAAAGTGCTGCACAAAACTTTTCACGAACTTAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTCCCAAAGGATTTATCTCCAAGTCCAAGTAGAGGTCAGCTAGGTGGATTTAGTTACGGTACTATGAGTAAAGTTGGTAGTTTTTCTAATGGTTTTGCTCAGGGATATAATCCAAGCCTGATTGGAGGACATGGACTTAGATTAGACGGTAGATTGAGTCCTGCTAATGTTGGCCGTAGTGGATATTCTCTTTTCAGTCCTAGTTATGGGACAGGACTCAACTTTGAGCCACCATTGAGCCAAAATGAAAACGAAAACTTTGCTTCTAACTTTATCATGGGCCGTGCATTGAGTTCTCCATACAGTGCAAGTCCGAGCAGGTACAATAATGCCATGGCATATGCTGCTGGTTCAAATGTTGGGAACAGTTCAGCCATGAGTTCAACAAATCAGAGTTTGTGGGGTAATGGAAATCTTAATTATGCTCATAACCCTGCAAGCTCTGATGCTTTCTTAGGTTACGGAAGTGAAAATTCAAGTATTGGTTCATTTGGCAATATTGGATCACTTTGGAGTACCTCCGTTGGTACTACTAATCAAGCTGGAACTATTGGCTCTGGTTATGGTAAAAGCAATCTTAATTATAGGCTTGGAGATGTGATTTTAGGGTCAAAAGCGGTAGGTTATGGAAAAAGCAGTGAAAGCAATGTTGAATCAGATTCGTCGTATGCTTTCTCAAATGGCAATTATGGTGAGGCATATAAAAATACCTTTGAAGCTGGGCCATTTTATCAAGACCATACTTGGAGATCAACCACTTCAGAACTAGAGGATTCTGGTCCTCTTAGTTTTGGCCTTGAAAATACCGTTTCAGATTTAATGCGCAAAAGCTCTAGTGGTGGTCACATTGGGGCTTATGCTGTTGCTAATAGACAATCAAACAGAGGAATTGCTGCTTAG 1443 0.4109 MDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQNVFSRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSPSRGQLGGFSYGTMSKVGSFSNGFAQGYNPSLIGGHGLRLDGRLSPANVGRSGYSLFSPSYGTGLNFEPPLSQNENENFASNFIMGRALSSPYSASPSRYNNAMAYAAGSNVGNSSAMSSTNQSLWGNGNLNYAHNPASSDAFLGYGSENSSIGSFGNIGSLWSTSVGTTNQAGTIGSGYGKSNLNYRLGDVILGSKAVGYGKSSESNVESDSSYAFSNGNYGEAYKNTFEAGPFYQDHTWRSTTSELEDSGPLSFGLENTVSDLMRKSSSGGHIGAYAVANRQSNRGIAA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01018 480 FunFam Heterogeneous nuclear ribonucleoprotein 1 3 85 - -
Mepo6g01018 480 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 80 IPR000504 GO:0003723
Mepo6g01018 480 SMART rrm1_1 107 179 IPR000504 GO:0003723
Mepo6g01018 480 SMART rrm1_1 5 76 IPR000504 GO:0003723
Mepo6g01018 480 PANTHER RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 2 476 - -
Mepo6g01018 480 FunFam Heterogeneous nuclear ribonucleoprotein 1 103 190 - -
Mepo6g01018 480 Gene3D - 103 191 IPR012677 -
Mepo6g01018 480 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 183 IPR000504 GO:0003723
Mepo6g01018 480 MobiDBLite consensus disorder prediction 79 101 - -
Mepo6g01018 480 CDD RRM2_Hrp1p 107 184 - -
Mepo6g01018 480 CDD RRM1_hnRNPA_hnRNPD_like 6 76 - -
Mepo6g01018 480 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 72 IPR000504 GO:0003723
Mepo6g01018 480 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 166 IPR000504 GO:0003723
Mepo6g01018 480 SUPERFAMILY RNA-binding domain, RBD 97 207 IPR035979 GO:0003676
Mepo6g01018 480 MobiDBLite consensus disorder prediction 84 100 - -
Mepo6g01018 480 SUPERFAMILY RNA-binding domain, RBD 3 96 IPR035979 GO:0003676
Mepo6g01018 480 Gene3D - 3 86 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01018 Mepo-Chr6 10732221 10736255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01018 6 176 Eukaryotic Initiation Factors Gene Family AT2G36660 22.543 5.56e-06 47.0