Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00974 ATGAGTCAACTCGGTTTATTATTGCAAGAACCGGTTCAGTCTCAAACTGAGTCAACAACGATTCTCGGTTTGTTAAGGGAACAAATGGACGGTGTGCCACGTCGGAGACGGAGTTTCAAGGAACGGTTTGGATTTATCGGTTGCTGTGGGGCCACCTGGGGATTCCGTTCTTCTTCTGAATCACAACAGAATCAGCAACGAATTCTTGATACGGATCCGAGTGAAGATCCGAATATGTGTGTGTCTCCGGTGATTCAAACGGGTTCGGGTTCGAGTTCTTCGAGTATGAATCTTGCGGCGGCGTTGGCGGCGGAGAGACAACTCCGAGGACCTGCTGCGGAAACGAGTAGCAGAGAGGGGAGGATGCCGGGAACGCCGTGGAGAGTGTCGTTGATGCGGTTGTTGGAGGAAACGGAAAACGGTGATACGGTGGCGGTTAAGGCGGAGGAGAAGATTGGTGGTGTGGCGGGGAATGATTCAGTGTGTTGTGTGTGTATGGGGAGGAATAAAGGTGCGGCGTTTATTCCATGTGGACATACTTTTTGCAGGGTTTGTTCTAGGGAGCTTTGGTTGAATAGAGGCTCTTGTCCCCTTTGTAATCGTTCTATTATTGAGATTCTTGACATTTTTTAG 633 0.4945 MSQLGLLLQEPVQSQTESTTILGLLREQMDGVPRRRRSFKERFGFIGCCGATWGFRSSSESQQNQQRILDTDPSEDPNMCVSPVIQTGSGSSSSSMNLAAALAAERQLRGPAAETSSREGRMPGTPWRVSLMRLLEETENGDTVAVKAEEKIGGVAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSIIEILDIF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00974 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 209 IPR013083 -
Mepo6g00974 210 ProSiteProfiles Zinc finger RING-type profile. 162 200 IPR001841 -
Mepo6g00974 210 SUPERFAMILY RING/U-box 157 207 - -
Mepo6g00974 210 MobiDBLite consensus disorder prediction 59 93 - -
Mepo6g00974 210 SMART ring_2 162 199 IPR001841 -
Mepo6g00974 210 Pfam Zinc finger, C3HC4 type (RING finger) 159 205 - -
Mepo6g00974 210 PANTHER OS01G0917900 PROTEIN 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00974 Mepo-Chr6 10167414 10168223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00974 21 210 C3H Transcription Factor Family AT4G22250 54.000 1.06e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00974 - - gmx:100804292 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00974 6 10167414 10168223 Mepo6g00974 6 10167414 10168223 ECH