Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00969 ATGGAGCATCTTCTTAGATCAATTCGATCATCGCGTTTTCGTTTTCGTTCATTTCCTTCTTCTCAAACCATAACTTCTCACTTCTCTCGCCGTCTTCACTCTTCTCTCTCTCCAAGAGTAGAATCTGCAACTGCTCGATCATCATCTTCATCAGTTTCCGATGTTTCGAGAGTTTTGCGAGGGGATTATGGACAGTATTCGATGTTACCTGCTGTATTGGCTGGTTTATTTGGAATTGGATTAGTGGAAACTGCTTATGCGGAAGAACAAGCTAATGAAGATGTGCAAGAAATTGCTATGAAAGAGCGTCAGAGAATTCAGGACTTGCTTACAGCTAAAGGAATTCGTCAAGGTTCTGTTCCTCGTTTCAATGTCGCTGTTAAAGGCCAAAAGGTGAGTATAAAGTTTCAAATTCCTCTGGGTTGTGAAGTTTCACAAGTTATTGCAAATCTTACTGCACATCTTGGACTGAAATCTGAAGGCCATAGCGGTGGTTCAGATATGATTTTGCGTGCATGGGACAGCACGGTTGCTTGGCAACTAACCCTGACTCATCCATCAAAGCAAAAACATATTCAACAGAATGATCCTTCCGTGACAGATACAAATGCACGTGATAGAGATCTATGTATACTTATATTTCATTCTCTCATTGGCACAGATAAAGTTGAAGTTGAATTTATGAAGGAAGGGAACTTAAGCCTTGAAGAGCTTGATGCTTTCATATCTGTTTTACAATTAGCTGGTAACAAGTTGGTAGAAAGAAATCCCTTGGAAAGAAAGCCAAAGGGAGAGACTGAACAGCCGCAATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGAGTAAAAGTATATGGGCTTGATGAACCCATAGGTATATCAAACAGTGAGATATCATGGGACATCATCGCTGGGTACGAGCATCAAAAACGGGTAATAGAAGATACAGTACTATTGGCTTTGCGCAGTCCTGAAGTATATGATGATATTGCTCGAGGGACTCGGCATAAGTTTGAGTCTAACAGACCTCGAGCCGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACCTCTTGTGCCCGTGTTATTGCCAATCAAGCAGGAGTCCCTTTGCTTTATGTGCCACTTGAGGTAGTGATGTCTGAATTCTACGGTAAAAGTGAACGCCTCTTAGGGAAAGTGTTTTCACTAGCAAACAATCTTCCCAATGGTGCTATTATATTTTTGGACGAGATTGATTCTCTTGCTGCTTCTCGTGATAATGATATGCATGAAGCTACACGTAGAATGTTGTCAGTATTATTGCGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTTGTCATTGCTGCCACAAATAGAAAGGAGGACCTTGATCCTGCATTAATTAGTCGGTTTGATACTATGATCGCTTTTGGTTTACCTGATCAACAAACTCGTCAGGAAATAGCATCTAAATATGCAAAGCACCTGTCTAAAGCCGAACTTGATGAACTTGCAAGAGTTGCAGAAGATATGGCTGGAAGAGATATCAGAGATGTTTGTTTGCAAGCGGAACGATCCTGGGCATCAAAGATTATCCGGGGACAAGTGTCTAAAGACGGCGAACAAGCAAACCTTCCACCTTTGCAAGAATATATAGCATGTGCTACAAATCGACGGGAAGCGCTGCTTAGTGCTGCTGCAAATAGGAAGATTCGAAGTTCTTCCCACCAAAGGATGCTAAATGAATAG 1743 0.4171 MEHLLRSIRSSRFRFRSFPSSQTITSHFSRRLHSSLSPRVESATARSSSSSVSDVSRVLRGDYGQYSMLPAVLAGLFGIGLVETAYAEEQANEDVQEIAMKERQRIQDLLTAKGIRQGSVPRFNVAVKGQKVSIKFQIPLGCEVSQVIANLTAHLGLKSEGHSGGSDMILRAWDSTVAWQLTLTHPSKQKHIQQNDPSVTDTNARDRDLCILIFHSLIGTDKVEVEFMKEGNLSLEELDAFISVLQLAGNKLVERNPLERKPKGETEQPQSVDKSISSLEAMGVKVYGLDEPIGISNSEISWDIIAGYEHQKRVIEDTVLLALRSPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVMSEFYGKSERLLGKVFSLANNLPNGAIIFLDEIDSLAASRDNDMHEATRRMLSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIAFGLPDQQTRQEIASKYAKHLSKAELDELARVAEDMAGRDIRDVCLQAERSWASKIIRGQVSKDGEQANLPPLQEYIACATNRREALLSAAANRKIRSSSHQRMLNE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00969 580 Pfam ATPase family associated with various cellular activities (AAA) 348 476 IPR003959 GO:0005524|GO:0016887
Mepo6g00969 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 523 IPR027417 -
Mepo6g00969 580 ProSitePatterns AAA-protein family signature. 449 468 IPR003960 GO:0005524|GO:0016887
Mepo6g00969 580 CDD RecA-like_protease 311 475 - -
Mepo6g00969 580 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 221 522 - -
Mepo6g00969 580 SMART AAA_5 344 479 IPR003593 GO:0016887
Mepo6g00969 580 Gene3D - 289 500 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00969 Mepo-Chr6 10103745 10111742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00969 344 544 Calmodulin-binding Proteins AT3G56690 35.577 3.45e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00969 - - gmx:100803362 832.787