Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00964 ATGGAGGGTAGTTCTAATGGAAGTTCTTCTTATGTGATGGGTGCTTTTGGAGAAAACAGTGGTGGGCTATGTCCTCCAATGATGATGATGCCTTTAGTCACTTCATCTCATCATAATGCTCATCATCCAATAAATTCCAACAACAACAACAATACTAATGCAAACAACACAAGCGGTCTTTTCCTTCCTATCCCTAATTCCACTAACAATAATAACAATCACTACACCAACTGTAATAACAACACCTCTTCTATCATGCTTCAAAATAACCATCAAAACACTCCTGGTTTAGGTTACTATTTCATGGACAACATCAACAACCATGGAAGCTCTTCTTCCTCTTCTTCTTCTGTCAAATCCAAGATCATGGCTCATCCTCACTATCACCGTCTCTTGGAAGCCTACATCAACTGTCAAAAGGTTGGAGCACCTAGTGAAGTAGTGGCAAGGTTAGAAGAAGCATGTGCAACTGCAGTGAGAATGGGTGGAGATGCAGTTGGATCGGGTTGTTTAGGTGAAGATCCAGCTCTAGATCAGTTCATGGAAGCTTACTGTGAGATGCTTATCAAGTATGAGCAAGAACTTTCCAAACCCTTAAAGGAAGCTATGCTTTTTCTTCAAAGGATTGAAGTCCAGTTCAAAAATCTTACAGTTTCTTCTTCAGATAATATTGCTTGTAATGAAGGTGGAGATAGGAATGGATCATCTGAAGAAGATCATGTTGATCTATACAACAATATGATAGATCCTCAAGCAGAAGACAGAGAGTTAAAGGGTCAGCTTTTGAGAAAGTACAGTGGATACTTGGGCAGTCTGAAGCAAGAATTTATGAAGAAAAGGAAAAAAGGAAAGCTACCAAAAGAGGCAAGGCAACAATTGCTGGAATGGTGGAGCAGACATTACAAATGGCCTTACCCATCTGAATCACAGAAGCTGGCTCTAGCAGAATCAACAGGTCTTGATCAGAAGCAAATAAACAACTGGTTTATTAATCAAAGGAAACGGCATTGGAAGCCTTCAGAGGACATGCAGTTTGTGGTGATGGATCCAAGTCATCCACATTATTACATGGATAATGTTCTCAGCAATTCATATCCCATGGATCTATCTAACACCATGCTCTAG 1125 0.4 MEGSSNGSSSYVMGAFGENSGGLCPPMMMMPLVTSSHHNAHHPINSNNNNNTNANNTSGLFLPIPNSTNNNNNHYTNCNNNTSSIMLQNNHQNTPGLGYYFMDNINNHGSSSSSSSSVKSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATAVRMGGDAVGSGCLGEDPALDQFMEAYCEMLIKYEQELSKPLKEAMLFLQRIEVQFKNLTVSSSDNIACNEGGDRNGSSEEDHVDLYNNMIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPSHPHYYMDNVLSNSYPMDLSNTML 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00964 374 Pfam KNOX2 domain 171 217 IPR005541 GO:0003677|GO:0005634
Mepo6g00964 374 Pfam ELK domain 256 277 IPR005539 GO:0003677
Mepo6g00964 374 SUPERFAMILY Homeodomain-like 278 354 IPR009057 -
Mepo6g00964 374 SMART KNOX2_2 167 218 IPR005541 GO:0003677|GO:0005634
Mepo6g00964 374 CDD homeodomain 288 340 IPR001356 GO:0003677
Mepo6g00964 374 ProSitePatterns 'Homeobox' domain signature. 314 337 IPR017970 GO:0000981|GO:0006355
Mepo6g00964 374 SMART HOX_1 278 343 IPR001356 GO:0003677
Mepo6g00964 374 ProSiteProfiles ELK domain profile. 256 276 IPR005539 GO:0003677
Mepo6g00964 374 Pfam KNOX1 domain 118 156 IPR005540 GO:0003677|GO:0005634
Mepo6g00964 374 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 53 345 - -
Mepo6g00964 374 Pfam Homeobox KN domain 296 335 IPR008422 GO:0003677|GO:0006355
Mepo6g00964 374 ProSiteProfiles 'Homeobox' domain profile. 276 339 IPR001356 GO:0003677
Mepo6g00964 374 SMART KNOX1_2 116 160 IPR005540 GO:0003677|GO:0005634
Mepo6g00964 374 FunFam Homeobox protein knotted-1-like 2 281 343 - -
Mepo6g00964 374 Gene3D - 281 343 - -
Mepo6g00964 374 SMART ELK_2 256 277 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00964 Mepo-Chr6 10052964 10059115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00964 118 374 Homeobox Transcription Factor Family AT1G62360 77.947 2.02e-131 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Mepo6g00964 KNOX2 8.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00964 - - gmx:100805837 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00964 6 10052964 10059115 Mepo6g00964 6 10052964 10059115 ECH