Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00961 ATGACAAACACTACTGTTCATGAAACCCATCAATATCCCACCAATTATAATTTCCCAATACTCGTTGGACAACAACAGATTCAACAAAACATCAACAATCAAGCGTCTGTTCCCAAACCTGTTACATGCATTGATAACACAACCGCTCATTTTGAACGTGTATACAACCATCCATCAGTTGCACTATGCGGATCGAGAAAAAGAAAATATAACAACCAAATGGCATTGGTGTGCTATATAAGGGAGGTTGAGCTTTCAAAAGACTCGTGGGCGTGGAGGAAATATGGGCAAAAACCCATTAAAGGATCTCCACATCCAAGGAGCTATTACAAATGTAGCACTTGGACAGATTGTCCAGCAAGAAGAAAAGTTGAAAAATGCAAAACTCAAGAGAACACTTATATTGTGACATATGAAGGTGAGCACAATCATGCAAAGCCAACATTAAATAAGAATGTTGTTGTTGGTACCTCCCAGCGCAAGTCACCAAAGACTGGATTACACTCTGCGGAAGAAGTTGGATCATCTACAAACATCACAAATTCAGGTTCGCCTAATGTGGTGATGTTGCAGATTGATCATCCGGAGAGCAGCAATGCCCAGGCTCTCGCTGATCAACCAAAAACCTCTTATCCGAAAATGAAACTATTAGAGTCAATTACCTGGTGTCGAAGAAGTTGGATCATCCTCAAATGTTAG 699 0.4049 MTNTTVHETHQYPTNYNFPILVGQQQIQQNINNQASVPKPVTCIDNTTAHFERVYNHPSVALCGSRKRKYNNQMALVCYIREVELSKDSWAWRKYGQKPIKGSPHPRSYYKCSTWTDCPARRKVEKCKTQENTYIVTYEGEHNHAKPTLNKNVVVGTSQRKSPKTGLHSAEEVGSSTNITNSGSPNVVMLQIDHPESSNAQALADQPKTSYPKMKLLESITWCRRSWIILKC 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00961 232 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 190 IPR044810 GO:0003700
Mepo6g00961 232 MobiDBLite consensus disorder prediction 159 184 - -
Mepo6g00961 232 Gene3D WRKY domain 64 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00961 232 SMART WRKY_cls 86 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00961 232 SUPERFAMILY WRKY DNA-binding domain 79 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00961 232 Pfam WRKY DNA -binding domain 87 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00961 232 ProSiteProfiles WRKY domain profile. 81 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00961 Mepo-Chr6 10039882 10041001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00961 65 162 WRKY Transcription Factor Family AT5G52830 53.061 1.66e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g00961 WRKY 5.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00961 - K13425 mtr:25486231 393.66