Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00959 ATGATGTTGCACAAATGTAGCACTTGGGCAGATTGTCCAGCAAGAAGAAAGGTAGAAAAAAGCAAAACTCAAGAGAACACTTATATTGTGACATATGAAGGAGAGCACGATCACGTAAAACCAACATTTAATAAGAATGTTGTTATTGGTACCTCCCAACACAAGTCCCCAGAGACTAGATTACCCGCCGCGGAAGAAGCTGGATCATCTTCAAACATCACAAATTCAGGTTCGCCTAGTGTGGTGATGTTGCAGTTTGATCATCCGGAGAGCAGCAATGCCCATGTTCTCGTTGATCAATCAAACATCCCTTATCCAGAAATGGAACTATTAGAGTCAATTACCCGTTGTCGAAGAAGCTGGATCATCCACAAATGTTAG 381 0.4199 MMLHKCSTWADCPARRKVEKSKTQENTYIVTYEGEHDHVKPTFNKNVVIGTSQHKSPETRLPAAEEAGSSSNITNSGSPSVVMLQFDHPESSNAHVLVDQSNIPYPEMELLESITRCRRSWIIHKC 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00959 126 ProSiteProfiles WRKY domain profile. 1 41 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00959 126 MobiDBLite consensus disorder prediction 65 81 - -
Mepo6g00959 126 MobiDBLite consensus disorder prediction 52 81 - -
Mepo6g00959 126 SMART WRKY_cls 5 40 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00959 126 SUPERFAMILY WRKY DNA-binding domain 4 40 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00959 126 Pfam WRKY DNA -binding domain 4 38 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00959 126 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 80 IPR044810 GO:0003700
Mepo6g00959 126 Gene3D WRKY domain 2 42 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00959 Mepo-Chr6 10032825 10033205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00959 4 56 WRKY Transcription Factor Family AT5G52830 43.396 7.21e-09 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g00959 WRKY 5.1e-08 CL0274