Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00953 ATGATCACATATCAAAATTTCATACTAAATTTCGTTCTCTTTGTATTGTCGATTACGAAAACTGAGGGAAGCTGTAAATCTGGCTGTGACCTTGCTCTAGCTTCATATTACATACAAGAAGGAACAAATCTAACTTACATTAGCAACCTCTTTAATCAACCACCCTCAGATATTCTTAAATACAATCCAAATCTTACAAACCCCGATGTTATTCATAGCCATACAAGACTAAACATACCGTTCACGTGTGATTGTCTAAGTGGTTTGTTCTTAGGACACACTTTTTCGTACAAAATAAAAACTGGTGACAATTACAAGGCACTTGCTAACATAGATTATTCAAGCCTTACTACTGAAGATTTTCTTATCAGAGTCAATAGTTATCTAGATACTAATATACCTACTGGCGTGACAATCAATGTTACTGTTAATTGCTCTTGTGGTGATAGAGATGTTTCAAAGGATTATGGGTTGTTTTTGACCTATCCCTTACGTAAGGGTGATAGTTTGCGGGGAGTTGCGGGGGAGAGTGGTGTTCTGGTGGAGGTTGTGCAGAGGTATAACACTGCATCGGATTTTAGTGCTGGTCATGGACTTGTGTTCTTGCCGGCCAAAGGAATGTCCAAAGGAGGCATTGCTGGCATAGTTGTTGGAGGAGCTTTTGGGATTTTACTTATAGTACTCATTCTATATGTTGTGTTCTATAGAAGAAAAAAAGTGGCTGATCAAGTAACCCTTCTACCAGTCCCAGGAGCATCTGAACTAGATCACAGCATGGATAAGACATCAGAGTCTACTACTGTTGTTTCTCCAAGGTTGACAGGTATTACAGTTGACAAGTCAGTGGAGTTCTCATATGAGGAGTTAGCCAAAGCTACTGACGGCTTTAGCGCGTCTAATATAATCGGTCGAGGTGGCTTTGGATTGGTATACTATGCCGAGCTACGAAATGAGAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCGAAAGAATTCCTAGCTGAACTAAAGGTTCTGACACACGTCCATCACTTGAACTTGGTGCGGCTAATTGGATATTGTGTCGAGGGCTCTTTATTTTTGGTTTATGAGTACATTGAGAATGGCAATTTAAGTCAACATTTGCGTGGCACAGGTAAGGATCCGTTATCATGGCCAGCTAGAGTTCAAATTGCATTAGACTCGGCAAGAGGATTGGAATATATTCATGAACATACAGTTCCTGTCTACATTCATCGAGATGTTAAATCAGCAAACATTTTGATAGACAAAAACTTCCGTGGAAAGGTTGCAGATTTCGGTCTGACAAAATTGACTGAATATGGTAGTTCTTCGTTACAAACACGCCTTGTCGGGACGTTCGGCTATATGCCCCCTGAATATGCACAGTATGGTGAAGTTTCTCCCAAAATAGATGTATATGCATTTGGAGTTGTTCTGTTTGAGCTTATATCTGGGAAGCAAGCTATTGTGAAGACAAATGAGGCTAAGAATGAATCAAAAGGACTAGTTGCACTGTTTGAAGAAGTTCTTGGTCTTTCAGAACCAAAAGAAGATCTTGGTAAACTTGTTGACCCTAGGCTTGGTGAAAATTACCCTATTGACTCAGTATTTAAGATGTCTCAGCTTGCTAAAGCTTGTACACATGAAAATCCTCAACTTAGACCAAGCATGAGATCAATTGTAGTTGCCTTAATGACATTATCATCAGCAGCTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCATTAGTCCATCTAATGTCTGGAAGGTAG 1785 0.3972 MITYQNFILNFVLFVLSITKTEGSCKSGCDLALASYYIQEGTNLTYISNLFNQPPSDILKYNPNLTNPDVIHSHTRLNIPFTCDCLSGLFLGHTFSYKIKTGDNYKALANIDYSSLTTEDFLIRVNSYLDTNIPTGVTINVTVNCSCGDRDVSKDYGLFLTYPLRKGDSLRGVAGESGVLVEVVQRYNTASDFSAGHGLVFLPAKGMSKGGIAGIVVGGAFGILLIVLILYVVFYRRKKVADQVTLLPVPGASELDHSMDKTSESTTVVSPRLTGITVDKSVEFSYEELAKATDGFSASNIIGRGGFGLVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGTGKDPLSWPARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLFELISGKQAIVKTNEAKNESKGLVALFEEVLGLSEPKEDLGKLVDPRLGENYPIDSVFKMSQLAKACTHENPQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00953 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Mepo6g00953 594 Gene3D Transferase(Phosphotransferase) domain 1 367 578 - -
Mepo6g00953 594 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 580 IPR044812 GO:0019199|GO:0045087
Mepo6g00953 594 Pfam LysM domain 36 80 IPR018392 -
Mepo6g00953 594 CDD STKc_IRAK 302 563 - -
Mepo6g00953 594 Gene3D Phosphorylase Kinase; domain 1 277 366 - -
Mepo6g00953 594 Pfam Protein tyrosine and serine/threonine kinase 299 565 IPR001245 GO:0004672|GO:0006468
Mepo6g00953 594 ProSiteProfiles LysM domain profile. 34 79 IPR018392 -
Mepo6g00953 594 FunFam PTI1-like tyrosine-protein kinase 3 367 580 - -
Mepo6g00953 594 Gene3D LysM domain 24 85 IPR036779 -
Mepo6g00953 594 FunFam LysM receptor kinase 2 275 366 - -
Mepo6g00953 594 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Mepo6g00953 594 SUPERFAMILY Protein kinase-like (PK-like) 273 566 IPR011009 -
Mepo6g00953 594 ProSiteProfiles Protein kinase domain profile. 296 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00953 594 SMART serkin_6 296 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00953 594 SMART LysM_2 35 80 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00953 Mepo-Chr6 9986700 9993478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00953 22 594 Receptor kinase-like Gene Family AT3G21630 56.667 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo6g00953 PK_Tyr_Ser-Thr 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00953 - K13429 gmx:100802308 892.108