Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00951 ATGAGTATTGTATATGATTCGGAGAGAATGAAGATTAAAATTTCAAGACAAGGAAACTCAAATCAACAATCTGAGTTTTTAAGGAACTCTAAATCAGGTGAAGAAAGACACATTCTATCTTGTGTGAAGAAGAGTGCTATTGCACTAGTTGAAAGAAAAATTTCAGCTTCTGCAGCAGAATCGTCACAACAAAATATTCATACAAATCAAAACAAAACATCAACATGCTCAAGAGATTCTGCAAATTCAAAGAAGAGAAGAGTTGAAAAATGTTGTAAACTTGATATTACCAAATCAAAAAACCATCATACTACATCAAAACACAAGAAAATAAAACTTGAAGGCAATAACAATTTTGAAGATGAAGAAGGTGACGAAGTTATATTTGTTTCAATGACAAAGTCAAGAAGCAAAGGAAAGTTGGAAAATATAATGGAAACCAAACAAAATATCAAAGCATGTCATCAGTGCTTGAGAAATGATAGGCCACAATTTGTACATTGTACAAAATGTCAGAAAATCTATTGTTTAAGATGTATTAAACAATGGTATCCCAATATGTTAGTTGGAGATATCGCAGAGAGGTGCCCCTTTTGCTGTAAGAATTGCAATTGCAATGTTTGCTTGTGTTCAAGAGGAATGATCAAGACGTCTAACAGGAACATCACAGATTGTGAAAAAGTTCATCATCACCGATATATGATTAATTTACTACTTCCATCTCTTGAACAAATTTTTGAAGAACAATGTCAAGAACAAGAGATTGAAGCAAGGATACAAGGAAAATCATGTTCAAAAATTAAGATACCACAAACTCCATGTCATGATAAGGAGCGTATTTATTGTGATCACTGTGCTACTTCAATTGTTGACCTTTATAGAAGTTGTCGTAAATGTTCCTTTGAAATATGCCTTAGTTGTTGCAAAGAAATACGCAACGGAAGTATCACACCACGCTTTGAAATGAAGTTTCAATACAAAAATAGAGGTGATGAATACATGCATGGGGGTGATCCTCTACCAATAACTTATGATACAAGTAATTTAGAGGGTAATGTTGAGATATTTACCAAATGGAATGTTAATGGTGATGGAAGTGTTGAATGTGCTCCAAAAGAATTAGGTGGTTGTGGTGGCTGTGTGATGGAGCTGAAACGCATTCTTCCAAATGGGAGGATATCTAAATTGGTAACAATTGACACTCGCCAGTTCTTTGAAGGTTATAAAGAGGGAAGAAGATATATAAATTTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCACCTTATGATGAGTTTGAAAATGTCTTGCCGCGCCATTGTGACGAGTTTATCCGTTGTTTGCCATTTCAAGAGTATAGCGATCCTCGATCAGGAATTCTCAATCTTGCTGCAAAGTTGCCACTACATGTCATAAAGCCTGACTTAGGTCCAAAAACTTACATTGCTTATGGAACCAGAGAAGAGCTTGGCAGAGGAGATTCTGTTACAAAACTCCATTGTGATATGGCAGACGCGGTCAATATTTTGACTCATATAACTGAGGTGAAATTAACAGATGAACAACTTTATGCTATTAAAAAAATAAAAAGAGCACATAAAGCTCAAGATAAGAAAGAGGGTCTTGTTCAAGATAATGGAGGTCCTTTTGAAATCAAACGAAAGCTATTTCCAAATGAAGTTCCATCAATCACAAAAGATACATCAGAAACAGCTGGTGCACTTTGGGACATATTTAGAAGAGAAGATACTGCAAAGTTAGAAGCATATCTTAGAAAGCATTCCAAAGAATTTAGGCATACTTATTGTTCTCCAGTAAAAGAGGTTATTCATCCTATTCATGACCAATGTTTTTATTTGACTCTTGAGCATAAGAAGAAGCTGGAGGAAGAGTTTGGTGTAGTACCTATGACTTTTGAGCAGAAGCTTGGTGAAGCAGTATTTATACCTGCCGGATGCCCTCACCAAGTCAGAAATCTGAAGTCATGCACAAAAGTTGCAGTAGACTTTGTATCACCAGAAAATGTGGATATATGCATGCTTTTAACTGAAGAGTTTCGTCGCCTTCCTAAGAATCACAGGGCAAGAGAAGACAAACTTGAGGTAAAAAAGATGATAATCCATGCTGTTGACCAAGTTGTTCAAGAGTTGGAAGCTTTCATTAGATGCTCATCATTGGACTGA 2184 0.3585 MSIVYDSERMKIKISRQGNSNQQSEFLRNSKSGEERHILSCVKKSAIALVERKISASAAESSQQNIHTNQNKTSTCSRDSANSKKRRVEKCCKLDITKSKNHHTTSKHKKIKLEGNNNFEDEEGDEVIFVSMTKSRSKGKLENIMETKQNIKACHQCLRNDRPQFVHCTKCQKIYCLRCIKQWYPNMLVGDIAERCPFCCKNCNCNVCLCSRGMIKTSNRNITDCEKVHHHRYMINLLLPSLEQIFEEQCQEQEIEARIQGKSCSKIKIPQTPCHDKERIYCDHCATSIVDLYRSCRKCSFEICLSCCKEIRNGSITPRFEMKFQYKNRGDEYMHGGDPLPITYDTSNLEGNVEIFTKWNVNGDGSVECAPKELGGCGGCVMELKRILPNGRISKLVTIDTRQFFEGYKEGRRYINFWPEMLKLKDWPPYDEFENVLPRHCDEFIRCLPFQEYSDPRSGILNLAAKLPLHVIKPDLGPKTYIAYGTREELGRGDSVTKLHCDMADAVNILTHITEVKLTDEQLYAIKKIKRAHKAQDKKEGLVQDNGGPFEIKRKLFPNEVPSITKDTSETAGALWDIFRREDTAKLEAYLRKHSKEFRHTYCSPVKEVIHPIHDQCFYLTLEHKKKLEEEFGVVPMTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDICMLLTEEFRRLPKNHRAREDKLEVKKMIIHAVDQVVQELEAFIRCSSLD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00951 727 SMART cupin_9 437 687 IPR003347 -
Mepo6g00951 727 MobiDBLite consensus disorder prediction 58 82 - -
Mepo6g00951 727 ProSiteProfiles JmjC domain profile. 456 687 IPR003347 -
Mepo6g00951 727 ProSiteProfiles Zinc finger RING-type profile. 154 199 IPR001841 -
Mepo6g00951 727 Pfam JmjC domain, hydroxylase 570 670 IPR003347 -
Mepo6g00951 727 SUPERFAMILY Clavaminate synthase-like 331 720 - -
Mepo6g00951 727 Gene3D Cupin 387 696 - -
Mepo6g00951 727 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 397 719 IPR045109 GO:0032454|GO:0033169
Mepo6g00951 727 MobiDBLite consensus disorder prediction 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00951 Mepo-Chr6 9970393 9974674 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo6g00951 JmjC 6.1e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00951 K15601 - mtr:25486220 564.303