Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00939 ATGGACAAAGCATGGGGACTAGCTCTTGATACTACTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCAAAACAACCATCATCTACATATACCAACGATAGAATGTTTCCTATTTTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGAAGGTGACCGGAAAATATCCGGTGAAGTCGATTTCTTCTCTGAAAGAAACAAACCATCACCTTCACATGAACACAACCAACATGTTAAATCCAATATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATTCATGTTAATACTGGTTTACAACTTGCAAACACTGGAAGTGATCAATCTGTAGTAGATGATGGAGTTTCATCTGATGCTGAAAATAAACGTGCCAAGACTACTGAGCTTGCACAATTGCAAGTGGAACTTCAACGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAACTACACGGCTTTGCAGATGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTTGTTAATGCAAAAGCTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAGGTACTACTAATGGAACAGCAGAAGTTGAAGATCAAGTGTCAAATTCTTCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGTAATGGTAAAACCGGTAGGGAAGACAGTCCAGAATCAGAAACACAAGGCTGGGGTCCAAACAAGGCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGTGCTAGATCAGAAGCTTCAATGATAAGTGATGGATGTCAATGGAGGAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGTGCATACTATAGATGCACTATGGCAGTTGGTTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCCGAGGACAAAACAATATTGGTAACAACATATGAAGGAACACATAACCATCCACTACCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTACCTTGTTCAACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCTACTGTTACATTAGATCTCACACAAAATTCAAATCCAAATCCATTGCAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCACTTTATAATCAATCTAAATTTTCTGGTCTTCAATTGTCTCAAGAAGTTGGTTCTTCTCATTTAACCACACAAGCTCCAACCCAACAACAACAGCAGCAACAGCCTTCTTTAGCTGACTCCGTCAGCGCCGCCACCGCTGCTATCACCGCCGATCCTAATTTCACCGCTGTTCTCGCAGCCGCGATCTCATCCATTATTGGTGGTGGCCATGCAAACAATACCAACAACAGCAACAACAACAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA 1683 0.4076 MDKAWGLALDTTSSSPIPISHSHPFLPSKQPSSTYTNDRMFPILGFPVNLTRNTNGEDEGDRKISGEVDFFSERNKPSPSHEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMQLVALMQKNHHTENEVVNAKAEEKNQGVGGAMVPRQFLEIGTTNGTAEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKAQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEVGSSHLTTQAPTQQQQQQQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNTNNSNNNSNSRNTISNFSGN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00939 560 MobiDBLite consensus disorder prediction 218 271 - -
Mepo6g00939 560 Gene3D WRKY domain 291 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00939 560 MobiDBLite consensus disorder prediction 218 252 - -
Mepo6g00939 560 MobiDBLite consensus disorder prediction 485 505 - -
Mepo6g00939 560 Coils Coil 179 199 - -
Mepo6g00939 560 Pfam WRKY DNA -binding domain 308 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00939 560 SUPERFAMILY WRKY DNA-binding domain 299 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g00939 560 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 112 548 IPR044810 GO:0003700
Mepo6g00939 560 FunFam probable WRKY transcription factor 31 291 368 - -
Mepo6g00939 560 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00939 560 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g00939 560 MobiDBLite consensus disorder prediction 119 138 - -
Mepo6g00939 560 Coils Coil 137 171 - -
Mepo6g00939 560 MobiDBLite consensus disorder prediction 538 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00939 Mepo-Chr6 9847089 9850046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00939 1 542 WRKY Transcription Factor Family AT1G62300 50.828 7.50e-156 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g00939 WRKY 5.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00939 - - gmx:100802124 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00939 6 9847089 9850046 Mepo6g00939 6 9847089 9850046 ECH
Mepo6g03482 6 46998837 47003218 Mepo6g00939 6 9847089 9850046 ECH
Mepo2g01543 2 23055477 23058745 Mepo6g00939 6 9847089 9850046 ECH