Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00936 ATGTCAATGGATTGGTCTAGAGGCAGAATCATCGGCCGTGGCTCGACTGCCACCGTCTATGTAGCTGATCGTTGCCATTCAGGTGGTGAAGTGTTTGCGGTGAAGTCCACGGAGCTTCACCGCTCAGAGTTATTGAAGAAAGAACAGCAAATTCTCTCCAAGTTAAAGTGTCCACAAATTGTGAGCTACCAAGGTTGTGAACTCACCTTTGAAAATGGTGTTCAATTGTTCAACTTGTTCATGGAGTATGCACCTAAGGGAACGGTTTCTGATTCAGTACGCAATGGAAATGGAATGGAAGAAGCTTTGGTGGGGTTCTACGCACGTCAAATTCTACTAGGGCTTAACTATCTTCATATGAATGGGATAGTGCATTGTGATTTGAAGGGACAGAACGTGTTGGTGACGGAACAAGGTGTGAAAATTGCGGATTTTGGATGTGCTAGGAGGGTGGAAGAGGAGTTGGTGATTTCAGGTACACCGGCTTTTATGGCACCGGAGGTGGCACGTGGGGAGGAGCAGGGGTTTGCTGCTGATGTATGGGCTTTGGGATGTACTTTGTTGGAGATGATCACTGGAAAGTTGCCGTGGCAAGGTTTTTCTGACCCTGCCGCGGTTTTGTATCGGATTGGATTCTCTGGCGATGTGCCAGAGATTCCTGATTATGTTTCTGAACAAGGGAAGGATTTTTTGAGGAAATGTTTCAAAAGAGATCCAAATGAGAGATGGTCGGTGGTTGAACTTCTTGGACATGAGTTTGTTGGGAAGTTTAAGGATTCAGTGCTTGATTCGGAAACTCCGACAACGGTGTTGGAAGGAGGTTTCTGGGATTGGGATTCTTTGGAAACAACTCAAGATGTGGTCCCAACACTTGAATGTAGTTGTTCCTCGGATTCTTCGAGTCCGCGGAGCAGAATCCAAAGTTTGTGTTCTGATGAGGCTGTTTGGGAATTTGATGATGATGAATGGGTTACAGTAAGAAGCAATGGTGAGGAGTTGAATGCATTGTCATTTGAAGAAATTGAAGATTATGAATCAGAAGACATTGTTTGTGAACTTGGTGTTCATGAGATTAGTTTGGTGATTTTTTATGAACCAAAAATTGTAGTTGAATTGAGTAGATGGAATGACATTTTTGATTATTTGTGTTTTAGAAGCTGCAATTGTGGCTTTTGTAGGAGCTGTGGCCCTATAGGAATGATTATAAAGCTTAGGAAATTTTTGTGA 1227 0.4328 MSMDWSRGRIIGRGSTATVYVADRCHSGGEVFAVKSTELHRSELLKKEQQILSKLKCPQIVSYQGCELTFENGVQLFNLFMEYAPKGTVSDSVRNGNGMEEALVGFYARQILLGLNYLHMNGIVHCDLKGQNVLVTEQGVKIADFGCARRVEEELVISGTPAFMAPEVARGEEQGFAADVWALGCTLLEMITGKLPWQGFSDPAAVLYRIGFSGDVPEIPDYVSEQGKDFLRKCFKRDPNERWSVVELLGHEFVGKFKDSVLDSETPTTVLEGGFWDWDSLETTQDVVPTLECSCSSDSSSPRSRIQSLCSDEAVWEFDDDEWVTVRSNGEELNALSFEEIEDYESEDIVCELGVHEISLVIFYEPKIVVELSRWNDIFDYLCFRSCNCGFCRSCGPIGMIIKLRKFL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00936 408 ProSiteProfiles Protein kinase domain profile. 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00936 408 SMART serkin_6 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00936 408 Gene3D Transferase(Phosphotransferase) domain 1 2 286 - -
Mepo6g00936 408 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 332 - -
Mepo6g00936 408 SUPERFAMILY Protein kinase-like (PK-like) 4 276 IPR011009 -
Mepo6g00936 408 Pfam Protein kinase domain 7 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00936 408 ProSitePatterns Protein kinases ATP-binding region signature. 11 35 IPR017441 GO:0005524
Mepo6g00936 408 CDD STKc_MAPKKK 4 254 - -
Mepo6g00936 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00936 Mepo-Chr6 9797325 9799162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00936 3 329 MAP Kinase Kinase Kinase AT1G05100 48.696 1.41e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo6g00936 Pkinase 2.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00936 K20716 - gmx:100802174 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03484 6 47014623 47015958 Mepo6g00936 6 9797325 9799162 ECH
Mepo2g01541 2 23006427 23013772 Mepo6g00936 6 9797325 9799162 ECH
Mepo6g00936 6 9797325 9799162 Mepo6g00936 6 9797325 9799162 ECH