Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00933 ATGGATCAAAAGACACAAGTGAAACCAGAGGAAATAAGGAATGATACACCAACACAAAATCAATCAAACCAAATAGTGTCAGTGTCTCGCCCTTTGTTTCACACTGCAAATGCTTCTGCCTTTTCATCCTACATGAGTAGAGCTCAACTCCAAGAATTCTCTCACCGACAACAGAAACAACAAGAATTGCAGAAAAAACTTGGCACCTTCTGGGCAAAACAAAATGAAGAAGTTGAGAAGACTGTTGATTTCAAAAATAATTGTTTGCCATTAGCAAGGATTAAGAAGATAATGAAAGCAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGATTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAACAACAAGGTCTTGGGCTAATGCAGAGGTGAACAAAAGAAAGACACTTCAAAATAGTGACATTGCATCTGGTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCCAAGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAAGTGTCCCAATAGAAAATGTTCCTTATTATCTGCCTATGCCACCTCAGTATGCTGCAGGTCCATCATATGGTCCTCCAAGAATGCTTATGGGAACCCCAAAGAAAGAAAACGACCCTTCTACTGATTTGCCAAATTCAGAAGATTAA 693 0.3867 MDQKTQVKPEEIRNDTPTQNQSNQIVSVSRPLFHTANASAFSSYMSRAQLQEFSHRQQKQQELQKKLGTFWAKQNEEVEKTVDFKNNCLPLARIKKIMKAEEGVSMISAEAPILIAKACEMFIMELTTRSWANAEVNKRKTLQNSDIASGVSSNEVFDFLVDIVPKEKTMERDIFMGIPRRESVPIENVPYYLPMPPQYAAGPSYGPPRMLMGTPKKENDPSTDLPNSED 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00933 230 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 51 185 - -
Mepo6g00933 230 SUPERFAMILY Histone-fold 50 160 IPR009072 GO:0046982
Mepo6g00933 230 MobiDBLite consensus disorder prediction 204 230 - -
Mepo6g00933 230 Gene3D Histone, subunit A 51 166 IPR009072 GO:0046982
Mepo6g00933 230 FunFam Nuclear transcription factor Y subunit gamma 53 166 - -
Mepo6g00933 230 MobiDBLite consensus disorder prediction 1 23 - -
Mepo6g00933 230 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 89 149 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00933 Mepo-Chr6 9765148 9765840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00933 70 222 CCAAT-HAP5 Transcription Factor Family AT1G08970 54.140 8.74e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo6g00933 CBFD_NFYB_HMF 1.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00933 K08066 - jre:109010478 182.57