Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00927 ATGTCTTCATCTTCTTCTTCTTCTCCTACTAGCGGAGTTGTGGATACTAACCCTTCACAACCCTCTGATGTGCGAACTTTTCACCGCCGTTTAGATTCTCATCAGACTCCAGAGATGAGTCTAAAAGCACCTGTGGTGAGACCTTATGTTCGATCAAAGTTGCCTCGGCTTCGTTGGACACCAGATCTTCACCGTTGCTTTGTGCATGCAGTTCAAAGGCTTGGAGGAGAAGAAAGGGCTACACCAAAGTTAGTTTTACAATTCATGAATATCAAGGGGCTTACTATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAAACAAGAGCAGATGATTGAAGCTGCAAAGAGAAGGGACATGGCAGCTGATTTATCAGTTTCAGCGATCTCCTCAGCCCTTGTTCCAAGCTACCAACTGAGTTATGGCCAAAGAATGGGTGCTTATTGGCCAGAGTCTTTCAATGGAACTCAAGGTAATCAATCAATTGTGATCTGTAATGGGGATGAGCAGAAGATGCACACTTACATCCTCTTTGATGGCATTCTCAGAGGCCAGACTGTTCAAGGGACCAAAAGCGACCAACAAAGATTCGAAGATATAATCAGGAGAGGAGAGAGAGTGAATGAAGACACAGTGCTGTCCCTACCAACAAGCTCAGGAGGCCCAGACACAAATGATGTCTCTCTTGATCTCAAACTCAACTGA 714 0.4482 MSSSSSSSPTSGVVDTNPSQPSDVRTFHRRLDSHQTPEMSLKAPVVRPYVRSKLPRLRWTPDLHRCFVHAVQRLGGEERATPKLVLQFMNIKGLTISHVKSHLQMYRSMKQEQMIEAAKRRDMAADLSVSAISSALVPSYQLSYGQRMGAYWPESFNGTQGNQSIVICNGDEQKMHTYILFDGILRGQTVQGTKSDQQRFEDIIRRGERVNEDTVLSLPTSSGGPDTNDVSLDLKLN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00927 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 111 IPR017930 -
Mepo6g00927 237 FunFam Myb family transcription factor 53 111 - -
Mepo6g00927 237 NCBIfam myb-like DNA-binding domain, SHAQKYF class 55 109 IPR006447 GO:0003677
Mepo6g00927 237 MobiDBLite consensus disorder prediction 215 237 - -
Mepo6g00927 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 38 137 IPR046955 GO:0003700
Mepo6g00927 237 SUPERFAMILY Homeodomain-like 53 110 IPR009057 -
Mepo6g00927 237 Gene3D - 54 111 - -
Mepo6g00927 237 Pfam Myb-like DNA-binding domain 57 107 IPR001005 -
Mepo6g00927 237 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00927 Mepo-Chr6 9538715 9542915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00927 46 186 G2-like Transcription Factor Family AT2G42660 46.622 5.83e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo6g00927 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00927 - - gmx:100798980 250.751