Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00915 ATGGATCAAAAGACACAAGTGAAACCAGAGGAAATAAGGAATGATGCACCAACACAAAATCAATCAAACCAAATCGTGTCAGTGTCTCGCCCTTTGTTTCACACTGCAAATGCTTCTGCCTTTTCATCCTACATGAGTAGAGCTCAACTCCAAGAATTCTCTCGCCGACAACAGAAACAACTAGAATTGCAGAAAAAACTTGGCACCTTCTGGGCAAAACAAAATGAAGAAGTTGAGAAGACCGTTGATTTCAAAAATAATTGCTTGCCATTAGCAAGGATTAAGAAGATAATGAAAGCAGAAGAAGGAGTGAGTATGATATCAGCTGAGGTACCTATTCTGGTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTAACAACAAGGTCTTGGGCTAATGCAGAGGTGAACAAAAGAAAGACACTTCAAAATAGTGACATTGCATCTGGTGTCTCAAGTAATGAAGTGTTTGATTTCCTAGTTGATATTGTCCCCAAGGAAAAAACAATGGAGCGTGACATATTTATGGGTATACCAAGAAGAGAAAGTGTCCCAATAGGGAATGTTCCTTATTATCTGCCTATGCCACCTCAGTATGCTGCAGGTCCATCATATGGTCCTCCAAGAATGCTTATGGGAACCCCAAAGAAAGAAAACGACCCTTCTACTGATTTGCCAAATTCAGAAGATTAA 693 0.3968 MDQKTQVKPEEIRNDAPTQNQSNQIVSVSRPLFHTANASAFSSYMSRAQLQEFSRRQQKQLELQKKLGTFWAKQNEEVEKTVDFKNNCLPLARIKKIMKAEEGVSMISAEVPILVAKACEMFIMELTTRSWANAEVNKRKTLQNSDIASGVSSNEVFDFLVDIVPKEKTMERDIFMGIPRRESVPIGNVPYYLPMPPQYAAGPSYGPPRMLMGTPKKENDPSTDLPNSED 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00915 230 Gene3D Histone, subunit A 49 166 IPR009072 GO:0046982
Mepo6g00915 230 MobiDBLite consensus disorder prediction 1 26 - -
Mepo6g00915 230 MobiDBLite consensus disorder prediction 204 230 - -
Mepo6g00915 230 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 89 149 IPR003958 -
Mepo6g00915 230 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 49 185 - -
Mepo6g00915 230 MobiDBLite consensus disorder prediction 12 26 - -
Mepo6g00915 230 SUPERFAMILY Histone-fold 69 160 IPR009072 GO:0046982
Mepo6g00915 230 FunFam Nuclear transcription factor Y subunit gamma 51 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00915 Mepo-Chr6 9412278 9412970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00915 70 222 CCAAT-HAP5 Transcription Factor Family AT1G08970 53.503 4.38e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo6g00915 CBFD_NFYB_HMF 6.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00915 K08066 - qsu:112026379 179.489