Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00910 ATGTCGACGGTGTACGTATTGGAACCGCCGACAAAGGGAAAAGTGATCGTGACCACCACGCGCGGCCCTATCGACATTGAACTATGGCCTAAAGAAGCTCCCAAAGCCGTTAGAAACTTCGTTCAACTTTGCCTCGAAGGTTACTACGATAACACCATCTTTCATCGTATCATCAAAGGCTTCCTCGTTCAGTGCGGTGATCCCACCGGCACCGGCACCGGAGGTGAGAGTATTTATGGAGATGTGTTTGGTGATGAGTTTCATTCGAGGATTAAGTTTAAGCATAGAGGTTTGGTTGCAATGGCGAATTCTGGAACACTGAATTCTAATGGAAGTCAGTTTTTCATTACTCTTGATCGCTGTGATTGGCTTGATCGGAAGCATACCATTTTCGGAAAGGTGACAGGAGATACATTGTATAATCTGTTGAGACTTGGCGACGCTGAGACTGATAAGAATGATCGGCCTTTAGATCCCCCAAAGATATTATCAGTTGAGGTGTTGTGGAACCCCTTTGAGGACATTGTTCCAAGAACACTTCAGAAACCTCAGACCAAAGCTACACGTGATGGTGATATGGAGGGTAAAAATGAAAAGAAGAAAGGTGTAAAAAATTTGAGTTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGAGGAAAAGGAATTGGCAGTGGTGAAGAAAAAGATTGTGAGCAGCCATGATGTCTTGAATGATCCTCGCCTTCTAAAGGACGAAAATGCTAATAATGAATTGAGTTCATCCGACAGTAAAATAAAAAAAGATCGGCAGTTATCTGTAAGGGATGCACTTAACTCTAAAAAAGAAGAGCCTCAGAAAGATTCGGAAGCTGATAAATTGGCTCATCTTGATTCCAGTGATGATGATGAAGCAGATTTTGATACAAGAATGCGCATGCAAATACTCAAAAAGCGGAAGGAACTGGATGTTCTGCCGCCCAAACCAAAGTTGAAAAATGGAAGGTCCAGGTCCAGTCCAGAGAACCGTACTGTGTCAAGAGCTAGGTCCAATTCCGTAAGTGGTGATGAGGATCAACCAAGAGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCCGAAGCAAGAGCTGAACGAATGGCTAATGCAGATACAGATATGCAGCTTCTGAATGAAGCTGAGAGAGGAAGACAACTGCAGAAGCAGAAGAAACGCAAAGTTCAAGGGCGTGAAGAGGAAGTTCTGGCAAAACTTGAGAAGTTTAAAACCAAGGTATCAGCAAAGGAAACGCCCACATCTGTTGAATCTAAACATGCTAGTGAGGAGGAATTAACTGACTGGAGTAGTGTTACCTTGAAATTTTCCCCCGGAGTTGGCAAGGATCACATGTCTCGCAAAGAGGATCCAAATGATTATGTTGTACATGACCCACTTTTGGAAAAGGGGAAAGAGAAGTTTAATAAGATGCAAGCCAAACAAAAGAGACGAGAACGGGAATGGGCTGGGAGATCCCTTACTTGA 1500 0.432 MSTVYVLEPPTKGKVIVTTTRGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRIIKGFLVQCGDPTGTGTGGESIYGDVFGDEFHSRIKFKHRGLVAMANSGTLNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTLYNLLRLGDAETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKPQTKATRDGDMEGKNEKKKGVKNLSLLSFGEEAEEEEKELAVVKKKIVSSHDVLNDPRLLKDENANNELSSSDSKIKKDRQLSVRDALNSKKEEPQKDSEADKLAHLDSSDDDEADFDTRMRMQILKKRKELDVLPPKPKLKNGRSRSSPENRTVSRARSNSVSGDEDQPRVEKLSMKKKGIGSEARAERMANADTDMQLLNEAERGRQLQKQKKRKVQGREEEVLAKLEKFKTKVSAKETPTSVESKHASEEELTDWSSVTLKFSPGVGKDHMSRKEDPNDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGRSLT 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00910 499 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
Mepo6g00910 499 MobiDBLite consensus disorder prediction 346 374 - -
Mepo6g00910 499 MobiDBLite consensus disorder prediction 179 199 - -
Mepo6g00910 499 SUPERFAMILY Cyclophilin-like 14 184 IPR029000 -
Mepo6g00910 499 CDD cyclophilin_CeCYP16-like 8 179 - -
Mepo6g00910 499 MobiDBLite consensus disorder prediction 185 199 - -
Mepo6g00910 499 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 220 IPR044666 -
Mepo6g00910 499 MobiDBLite consensus disorder prediction 330 345 - -
Mepo6g00910 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 MobiDBLite consensus disorder prediction 240 404 - -
Mepo6g00910 499 MobiDBLite consensus disorder prediction 417 499 - -
Mepo6g00910 499 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 MobiDBLite consensus disorder prediction 452 499 - -
Mepo6g00910 499 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Mepo6g00910 499 MobiDBLite consensus disorder prediction 254 329 - -
Mepo6g00910 499 Gene3D - 2 182 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00910 Mepo-Chr6 9352263 9360580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00910 9 172 U-box Gene Family AT5G67530 46.951 7.39e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00910 K12737 - gmx:100793148 756.903