Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00909 ATGAGTGACTCAAAGTATGCAACCACCGCAAACAATGGCCAGTATGTCTCTTCAGATCAAATGAAAAGTGAGGCTGTGCTAGAATTTTCCCCAGAAGAGGAAGATATCGTTGCAAAAATGTTTAGATTGGTCGGAAAGAGATGGCATCTCATTGCTGGAAGAATCCCCGGAAGAACCCCAGAAGATATTGAAAAGTATTGGACCTCAAAGTTCTCATCATCAACTGCATGCTAA 234 0.4188 MSDSKYATTANNGQYVSSDQMKSEAVLEFSPEEEDIVAKMFRLVGKRWHLIAGRIPGRTPEDIEKYWTSKFSSSTAC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00909 77 CDD SANT 28 67 IPR001005 -
Mepo6g00909 77 ProSiteProfiles Myb-like domain profile. 29 71 IPR001005 -
Mepo6g00909 77 Pfam Myb-like DNA-binding domain 28 68 IPR001005 -
Mepo6g00909 77 Gene3D - 28 71 - -
Mepo6g00909 77 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 72 - -
Mepo6g00909 77 SUPERFAMILY Homeodomain-like 29 71 IPR009057 -
Mepo6g00909 77 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 75 IPR017930 -
Mepo6g00909 77 SMART sant 25 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00909 Mepo-Chr6 9337053 9338006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00909 29 72 MYB Transcription Factor Family AT5G52600 45.455 1.68e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo6g00909 Myb_DNA-binding 9.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00909 - - tpra:123897785 133.65