Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00906 ATGGTGAGGTTGAGGAGGAGTTATCTCCAAGCTGAGGCAGATTGTACAAAAGCAATAAGTCTTGACAAAAAGAGTGTGAAGGCCTACTTCCGTAGAGGTGCAGCTAGAGAGATGCTAGGCTACTACAAAGAAGCAATTGATGATTTTAAATATGCCCTTGTACTTGAGCCAACCAACAAAAGGGCTGCTTCAGCTGCTGAAAGATTGAGGAATCTAATACTCAAGAAGAGTCGAAGGATTTGCAAGGATTTTGAGTTAGGAGGGAGACACTACAAGAAATCCTCTAATTACTAA 294 0.415 MVRLRRSYLQAEADCTKAISLDKKSVKAYFRRGAAREMLGYYKEAIDDFKYALVLEPTNKRAASAAERLRNLILKKSRRICKDFELGGRHYKKSSNY 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00906 97 SMART tpr_5 26 59 IPR019734 GO:0005515
Mepo6g00906 97 PANTHER AMIDASE 1 7 70 - -
Mepo6g00906 97 Gene3D Tetratricopeptide repeat domain 2 84 IPR011990 GO:0005515
Mepo6g00906 97 ProSiteProfiles TPR repeat profile. 26 59 IPR019734 GO:0005515
Mepo6g00906 97 Pfam Tetratricopeptide repeat 27 59 IPR013105 -
Mepo6g00906 97 ProSiteProfiles TPR repeat region circular profile. 26 59 - -
Mepo6g00906 97 SUPERFAMILY TPR-like 7 64 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00906 Mepo-Chr6 9286621 9287279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00906 6 70 Calmodulin-binding Proteins AT3G25230 36.923 7.43e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00906 - - pvu:PHAVU_002G330000g 120.938