Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00888 ATGAATGACGATCACGCCATATATAACGCTCTATATGGAGTGTTTGCAGATTCGTCTTGTAGAAAGCGAAGAAAACACTGCGATTTCTCGAAGAATCAAGACCTTACTAAACCGGGAATGGGAATGAAGCTAATGGAGAAAATGGGTTATAAAGGGGGTGGTCTTGGAAAGAATGAGCAAGGTATTTTGAATCCTATTGAGGCGAAACTGAGGGATAAATATTCTGGTCTTGGATTTAACAATTCGAAGGAGACTATAACTCCGCTGCCAGCTTTGGAGACGGAAAAGAAGAGTGAACCGGGAGAAGGCGTGCAGCCTATAGTTGGAAGAAAGAAAAGATTTAACAAATCGAAGGAGACTATAACTCCGCTGCCAGCTTTGGAGACGGAGAAGAAGAGTGAACCGGGAGAAGGCGTGCAGCCTATAGTTGGAAGAAAGAAAAGACATAGCTGGTGA 456 0.4342 MNDDHAIYNALYGVFADSSCRKRRKHCDFSKNQDLTKPGMGMKLMEKMGYKGGGLGKNEQGILNPIEAKLRDKYSGLGFNNSKETITPLPALETEKKSEPGEGVQPIVGRKKRFNKSKETITPLPALETEKKSEPGEGVQPIVGRKKRHSW 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00888 151 SMART G-patch_5 35 80 IPR000467 GO:0003676
Mepo6g00888 151 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 22 123 IPR045211 GO:0000390
Mepo6g00888 151 MobiDBLite consensus disorder prediction 88 151 - -
Mepo6g00888 151 ProSiteProfiles G-patch domain profile. 37 82 IPR000467 GO:0003676
Mepo6g00888 151 Pfam G-patch domain 39 78 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00888 Mepo-Chr6 9173026 9173604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00888 35 78 C2H2 Transcription Factor Family AT5G26610 50.000 1.83e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00888 K13103 - gmx:100781621 107.071