Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00887 ATGAGTTGCATTCCATGTTGCTGCAAATCCGATGTTAAATCAACATCTTACAACAAAGTTTCCAACAAAGTTTCTAAAGGAAGAAGAACATTCAAATCATTAGCAGCTGCTATGTCACAAAAAACAGGTAGCAGCAGACATAGACAAATTACAGCAGAAATACTAAAATATGGAGCTGCAAAAAATGATGTTAAAGTATTAACATATGAAGAAATTGCTGAGGCAACAAACAACTTCGGTTCTGATTGTCTTGTGGGAGAAGGTGGATTTGGGAATGTGTATAAAGGATACATGAAAAGCATTGAACAAAATGTAGCTGTGAAGACTCTGAACAGGGATGGGAATCAGGGAACAAGAGAATTTTTCGCAGAAATTTTAATGTTGAGTATGGTGAATCATCCAAACCTAGTGAAACTTGTCGGTTATTGTGTAGAAGATGATCAAAGGATTTTAGTTTATGAGTACATGGTCAATGGAAGCTTGGAAAATCACCTTCTTGATGTAGGTAATGATAAGGAACCATTGGATTGGCATACAAGGATGAAAATTGCCAACGGAGCAGCAAGAGGACTTGAATATCTGCATAACTACGCAGATCCACCGGTGATTTTTCGTGATTTAAAATCGTCTAATATACTATTAGATGAAAATTTCAATCCAAAGCTTTCTGATTTTGGTCTTGCCAAGATTGCCCCAAGAGAGGGTGAGTTTGTGCCCAAAACTAGAGTTATGGGGACTTATGGCTACTGTGCACCAGAATATGTTGCTACTGGTCAATGTACCTCAAAGTCAGATATTTATAGCTTTGGTGTTGTGTTTTTGGAAATAATCAGTGGTAGGAGAGTAATCGACACTGCAAGAGATGCAGAAGAACAAAACTTGATTGATTGGGCACAACCTTTGTTTGAGGATAGAGCAAAGTTCACTCTAATGGCTGATCCTTTGCTTAAAGGAAAGTTCCCTGTAAAGGGACTATTTCAAGCCCTTGCAGTGGCAGCAATGTGTCTACAAGAAGAAGCTGGCACGCGCCCGTACATGGATGATGTCGTAGCGGCTCTTGCACATTTAGCAGTACACAAAACTGATGAAAAAGACATAGCTGGTGAATCTATAAAAACTGCTGGTCATGTTGAGTCTTTTAGAGCTGCAAGTGGAAGTTCATTTGCCGCTGATAGGGCATCATAG 1185 0.3916 MSCIPCCCKSDVKSTSYNKVSNKVSKGRRTFKSLAAAMSQKTGSSRHRQITAEILKYGAAKNDVKVLTYEEIAEATNNFGSDCLVGEGGFGNVYKGYMKSIEQNVAVKTLNRDGNQGTREFFAEILMLSMVNHPNLVKLVGYCVEDDQRILVYEYMVNGSLENHLLDVGNDKEPLDWHTRMKIANGAARGLEYLHNYADPPVIFRDLKSSNILLDENFNPKLSDFGLAKIAPREGEFVPKTRVMGTYGYCAPEYVATGQCTSKSDIYSFGVVFLEIISGRRVIDTARDAEEQNLIDWAQPLFEDRAKFTLMADPLLKGKFPVKGLFQALAVAAMCLQEEAGTRPYMDDVVAALAHLAVHKTDEKDIAGESIKTAGHVESFRAASGSSFAADRAS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00887 394 Pfam Protein kinase domain 84 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00887 394 FunFam Serine/threonine-protein kinase PBS1 156 371 - -
Mepo6g00887 394 Gene3D Phosphorylase Kinase; domain 1 19 155 - -
Mepo6g00887 394 CDD STKc_IRAK 85 353 - -
Mepo6g00887 394 SUPERFAMILY Protein kinase-like (PK-like) 64 359 IPR011009 -
Mepo6g00887 394 FunFam receptor-like protein kinase FERONIA 38 155 - -
Mepo6g00887 394 PANTHER OS07G0668900 PROTEIN 5 365 - -
Mepo6g00887 394 ProSiteProfiles Protein kinase domain profile. 79 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00887 394 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Mepo6g00887 394 SMART serkin_6 79 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00887 394 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00887 Mepo-Chr6 9169337 9171923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00887 65 358 Glycoside Hydrolase AT3G07070 61.224 1.91e-132 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo6g00887 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00887 - - mtr:25486126 734.176