Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00821 ATGGCTTCTCTTGCTTTCTTCAGAAAACCCCTTCTCTTCTCTTTCAATTTCATATCTCGTGCAACTTCTTCCATCAACAACAATGCATCTTCTCTTGCTTCTCTCCAGAGATCCATGGCTACGGCCACTTTCAAACGGACAAAGCCCCATGTTAATGTTGGCACTATTGGTCATGTGGATCATGGAAAAACCACACTAACTGCTGCAATTACAAAGGTACTAGCTGGTGAAGGTAAAGCCAAGGCCATTGCTTTTGATGACATCGACAAGGCTCCCGAGGAAAAGGCGAGAGGAATTACTATTGCTACAGCTCATGTTGAGTATGAGACAGAAAAGAGGCATTATGCCCATGTTGATTGCCCAGGACATGAAGACTATGTCAAGAACATGATAACTGGAGCTGCACAAATGGATGGTGGAATTCTTGTGGTTTCTGCTGCAGATGGCCCAATGCCTCAAACAAAGGAGCATATACTCCTTGCTCGTCAGGTTGGTGTGCCATCACTGGTCTGCTTTCTAAATAAAGTAGATGTTGTTGATGATCCAGATTTACTTGAACTTGTTGAAATGGAGCTTCGCCAACTACTTACTTTCTACAAATTTCCTGGAGATGAGATTCCAGTTGTGAGAGGTTCAGCTCTGCATGCCTTGCAAGGGACTAATTACGAACTAGGAAAGAAAGCTATCTTGGAACTAATGGATGCTGTGGACGAATACATAGCTGAACCCGTCCGACAGCTTGACAAACCTTTTTTAATGCCAATAGAAGATATTTTCTCTATTCAGGGGCGTGGAACTGTTGCCACTGGTCGTGTTGAACAAGGTACTATCAAAGTTGGTGAAGAGGTTGAAATACTAGGATTGAAACAGGGTGAACCTTTGAAGACTACTGTAACAAGTGTGGAAACATTTAAGAAAAATATGGAGAGAGGAGAAGGTGGTGATAATGTAGGACTTCTTCTACGAGGTCTTAAGCGTGGTGATGTGCAGAGGGGAATGGTTATCGCCAAGCCTGGTACATTGAAAACATATAAGAAGTTTGAAGCAGAAATTTATGTCCTCTCAGAAGATGAAGGTGGCCGTCATAGTGCATTTTTCTCTACCTATATGCCTCAATTTTACCTGAAGACTGCAGACATTACCGGAAAGGTTCAATTACCTGATGATGTCAGGATGGTTATGCCTGGTGATAATGTGACTGCAACTTTTGAGCTGATGTTACCTTTTCCTCTTGAACAGGGACAAAAATTTGCTTTTAGAGAAGGCGGCCGGACAGTTGGACAAGGAGTTGTCTCCAAAGTGCTTTCCTAG 1311 0.4287 MASLAFFRKPLLFSFNFISRATSSINNNASSLASLQRSMATATFKRTKPHVNVGTIGHVDHGKTTLTAAITKVLAGEGKAKAIAFDDIDKAPEEKARGITIATAHVEYETEKRHYAHVDCPGHEDYVKNMITGAAQMDGGILVVSAADGPMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPDLLELVEMELRQLLTFYKFPGDEIPVVRGSALHALQGTNYELGKKAILELMDAVDEYIAEPVRQLDKPFLMPIEDIFSIQGRGTVATGRVEQGTIKVGEEVEILGLKQGEPLKTTVTSVETFKKNMERGEGGDNVGLLLRGLKRGDVQRGMVIAKPGTLKTYKKFEAEIYVLSEDEGGRHSAFFSTYMPQFYLKTADITGKVQLPDDVRMVMPGDNVTATFELMLPFPLEQGQKFAFREGGRTVGQGVVSKVLS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00821 436 Gene3D Translation factors 380 435 - -
Mepo6g00821 436 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 48 244 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 FunFam Elongation factor Tu 246 376 - -
Mepo6g00821 436 Gene3D Translation factors 246 376 - -
Mepo6g00821 436 CDD EFTU_II 251 339 IPR033720 -
Mepo6g00821 436 NCBIfam elongation factor Tu 39 435 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mepo6g00821 436 CDD EFTU_III 342 431 - -
Mepo6g00821 436 FunFam Elongation factor Tu 39 243 - -
Mepo6g00821 436 Pfam Elongation factor Tu C-terminal domain 341 434 IPR004160 -
Mepo6g00821 436 Gene3D - 39 243 IPR027417 -
Mepo6g00821 436 SUPERFAMILY Translation proteins 245 341 IPR009000 -
Mepo6g00821 436 NCBIfam small GTP-binding protein domain 51 192 IPR005225 GO:0005525
Mepo6g00821 436 Pfam Elongation factor Tu domain 2 265 335 IPR004161 GO:0005525
Mepo6g00821 436 PANTHER ELONGATION FACTOR TU-RELATED 37 435 - -
Mepo6g00821 436 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 89 104 IPR031157 -
Mepo6g00821 436 Hamap Elongation factor Tu [tuf]. 39 436 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mepo6g00821 436 Pfam Elongation factor Tu GTP binding domain 48 240 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 266 IPR027417 -
Mepo6g00821 436 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 341 435 IPR009001 -
Mepo6g00821 436 CDD EF_Tu 49 243 IPR041709 -
Mepo6g00821 436 PRINTS GTP-binding elongation factor signature 132 143 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 PRINTS GTP-binding elongation factor signature 96 104 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 PRINTS GTP-binding elongation factor signature 116 126 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 PRINTS GTP-binding elongation factor signature 52 65 IPR000795 GO:0003924|GO:0005525
Mepo6g00821 436 PRINTS GTP-binding elongation factor signature 169 178 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00821 Mepo-Chr6 8397836 8401091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00821 46 434 Eukaryotic Initiation Factors Gene Family AT5G60390 29.032 2.10e-42 153