Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00798 ATGGGTTGTGTTCATGGAAAGTGTTGCAGTCGTTATCCTGCACCATCAATTGGTGGCTCTAGGGACTATAGAGAACCTGTTCCTAAGAAGCACATACTCACACAAAGATCAGTTCACTTTGTTGATGTTGCTTCACACAATTTCACTATGGAATACTCTGTACTTACTCAGAGAGGTTACTATCCTGATTCACCTGATAAGGAAAACCAAGATTGTTATTGTGTTAGGACACAATTGCAAGGTAATCCTAGTGTTCATTTCTTTGGTGTTTATGATGGACATGGTGAATTTGGTGGACTGTGTTCTAATTTTGTTAAGAATAAGTTGGTTGAAAAATTGTCTAATGATTCTGCATTGTTAGAGGATCCTGTTAAGGCTTATAATTCAGCTTTTTTGGCTACGAATGATGAGTTGCATAAGAGTGAGATTGATGATTGTATGAGTGGTACTACTGCGATTACAGTGTTGGTTATAGGGGATACACTTTATGTTGCGAATGTTGGTGATTCGAGGGCGGTGTTGGCTGTTAAGGATGGGAATAGAATTGTAGCTCAGGATTTGTCTTCTGATCAGACACCATTTAGGAGAGATGAATATGAGAGAGTGAAGCTTAGTGGTGCTAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCTGATATTCAGACTTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCTAGATTGTGGGTTCAGAATGGGATGATTCCTGGAGCTGCTTTTACAAGGAGTGTAGGGGATAGTTTGGCTGAGACTATTGGTGTTATTGCGGTTCCGGAGGTGTTAACGGTTCAGCTTAAGCCAGATCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCCTATCAAGCCAAACTGTAGTTGATATGGCTGCAAGTTATTCAGATCCCCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTACAAATTATGGTTGGAACATGAGGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCCGTCTCATTCAGGTACATCTGAGTACGGATCAGGAGAGATCATCGTCAGTACTATAACGAGGGCCAAAAAGGGAAAGGGAACTTCTGGTATATCTGCCACCGCCGGTATGGATGTTCATCGTGCTGTGACGAATGGTTTCTCTGATTCGCTATCCGGTCAACATGTGGTCTCAACGAGAAGCCACGCCATTGTAGTTCCCTCTCCCGCATGTCAAAGTCCAGTTGAATTGGTACAGTTTAAGGTGCATTATCTTAGCAGTGGAAGGACTTCTTCTCTTGGACTTGTAGAAAGCATACTTTCTGTTTTCAATCTTTTGCTAATTCAAGTTAACATGTCATTTAACTACACAGAAGCACTTCAGGGGTATACCTAA 1404 0.4195 MGCVHGKCCSRYPAPSIGGSRDYREPVPKKHILTQRSVHFVDVASHNFTMEYSVLTQRGYYPDSPDKENQDCYCVRTQLQGNPSVHFFGVYDGHGEFGGLCSNFVKNKLVEKLSNDSALLEDPVKAYNSAFLATNDELHKSEIDDCMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAQDLSSDQTPFRRDEYERVKLSGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMIPGAAFTRSVGDSLAETIGVIAVPEVLTVQLKPDHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGPSHSGTSEYGSGEIIVSTITRAKKGKGTSGISATAGMDVHRAVTNGFSDSLSGQHVVSTRSHAIVVPSPACQSPVELVQFKVHYLSSGRTSSLGLVESILSVFNLLLIQVNMSFNYTEALQGYT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00798 467 CDD PP2Cc 67 341 IPR001932 -
Mepo6g00798 467 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mepo6g00798 467 SUPERFAMILY PP2C-like 38 343 IPR036457 -
Mepo6g00798 467 Gene3D - 35 343 IPR036457 -
Mepo6g00798 467 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 46 343 - -
Mepo6g00798 467 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
Mepo6g00798 467 SMART PP2C_4 47 339 IPR001932 -
Mepo6g00798 467 Pfam Protein phosphatase 2C 78 316 IPR001932 -
Mepo6g00798 467 PANTHER PROTEIN PHOSPHATASE 67 340 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00798 Mepo-Chr6 8182233 8185248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00798 1 346 PP2C-type Phosphatase Gene Family AT3G06270 71.633 2.81e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00798 - - gsj:114373061 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00798 6 8182233 8185248 Mepo6g00798 6 8182233 8185248 ECH
Mepo1g00832 1 7963492 7967164 Mepo6g00798 6 8182233 8185248 PCT